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基于递归神经网络的阿尔茨海默病进展预测模型。

Predictive Modeling of the Progression of Alzheimer's Disease with Recurrent Neural Networks.

机构信息

Health Care Services Research Center, Department of Industrial Engineering, Tsinghua University, Beijing, 100084, China.

Big Data Lab, Division of Engineering and Information Science, The Pennsylvania State University, Malvern, PA, 19355, USA.

出版信息

Sci Rep. 2018 Jun 15;8(1):9161. doi: 10.1038/s41598-018-27337-w.

DOI:10.1038/s41598-018-27337-w
PMID:29907747
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6003986/
Abstract

The number of service visits of Alzheimer's disease (AD) patients is different from each other and their visit time intervals are non-uniform. Although the literature has revealed many approaches in disease progression modeling, they fail to leverage these time-relevant part of patients' medical records in predicting disease's future status. This paper investigates how to predict the AD progression for a patient's next medical visit through leveraging heterogeneous medical data. Data provided by the National Alzheimer's Coordinating Center includes 5432 patients with probable AD from August 31, 2005 to May 25, 2017. Long short-term memory recurrent neural networks (RNN) are adopted. The approach relies on an enhanced "many-to-one" RNN architecture to support the shift of time steps. Hence, the approach can deal with patients' various numbers of visits and uneven time intervals. The results show that the proposed approach can be utilized to predict patients' AD progressions on their next visits with over 99% accuracy, significantly outperforming classic baseline methods. This study confirms that RNN can effectively solve the AD progression prediction problem by fully leveraging the inherent temporal and medical patterns derived from patients' historical visits. More promisingly, the approach can be customarily applied to other chronic disease progression problems.

摘要

阿尔茨海默病(AD)患者的就诊次数各不相同,就诊时间间隔也不均匀。尽管文献中已经揭示了许多疾病进展建模方法,但它们未能在预测疾病未来状况时利用患者病历中这些与时间相关的部分。本文研究了如何通过利用异构医疗数据来预测患者下一次就诊时的 AD 进展情况。美国国家阿尔茨海默病协调中心提供的数据包括 2005 年 8 月 31 日至 2017 年 5 月 25 日期间的 5432 名可能患有 AD 的患者。采用长短期记忆递归神经网络(RNN)。该方法依赖于增强的“多对一”RNN 架构来支持时间步长的变化。因此,该方法可以处理患者不同的就诊次数和不均匀的时间间隔。结果表明,该方法可以以超过 99%的准确率用于预测患者下一次就诊时的 AD 进展情况,明显优于经典基线方法。这项研究证实,RNN 可以通过充分利用患者历史就诊中得出的固有时间和医疗模式,有效地解决 AD 进展预测问题。更有前途的是,该方法可以常规应用于其他慢性疾病进展问题。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c5f8/6003986/2ffc87ae84dd/41598_2018_27337_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c5f8/6003986/49d649d84b57/41598_2018_27337_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c5f8/6003986/28fe9de25459/41598_2018_27337_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c5f8/6003986/42c62b6f0a7d/41598_2018_27337_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c5f8/6003986/2ffc87ae84dd/41598_2018_27337_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c5f8/6003986/49d649d84b57/41598_2018_27337_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c5f8/6003986/28fe9de25459/41598_2018_27337_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c5f8/6003986/42c62b6f0a7d/41598_2018_27337_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c5f8/6003986/2ffc87ae84dd/41598_2018_27337_Fig4_HTML.jpg

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