Yi Fan, Li Li, Xu Li-Jia, Meng Hong, Dong Yin-Mao, Liu Hai-Bo, Xiao Pei-Gen
1Key Laboratory of Cosmetic, China National Light Industry, Beijing Technology and Business University, No. 11/33, Fucheng Road, Haidian District, Beijing, 100048 People's Republic of China.
2Beijing Key Laboratory of Plant Resources Research and Development, Beijing Technology and Business University, No. 11/33, Fucheng Road, Haidian District, Beijing, 100048 People's Republic of China.
Chin Med. 2018 Jun 19;13:33. doi: 10.1186/s13020-018-0190-0. eCollection 2018.
In recent years, studies of traditional medicinal plants have gradually increased worldwide because the natural sources and variety of such plants allow them to complement modern pharmacological approaches. As computer technology has developed, in silico approaches such as virtual screening and network analysis have been widely utilized in efforts to elucidate the pharmacological basis of the functions of traditional medicinal plants. In the process of new drug discovery, the application of virtual screening and network pharmacology can enrich active compounds among the candidates and adequately indicate the mechanism of action of medicinal plants, reducing the cost and increasing the efficiency of the whole procedure. In this review, we first provide a detailed research routine for examining traditional medicinal plants by in silico techniques and elaborate on their theoretical principles. We also survey common databases, software programs and website tools that can be used for virtual screening and pharmacological network construction. Furthermore, we conclude with a simple example that illustrates the whole methodology, and we present perspectives on the development and application of this in silico methodology to reveal the pharmacological basis of the effects of traditional medicinal plants.
近年来,对传统药用植物的研究在全球范围内逐渐增加,因为此类植物的天然来源和种类使其能够补充现代药理学方法。随着计算机技术的发展,虚拟筛选和网络分析等计算机模拟方法已被广泛用于阐明传统药用植物功能的药理学基础。在新药发现过程中,虚拟筛选和网络药理学的应用可以在候选物中富集活性化合物,并充分表明药用植物的作用机制,降低成本并提高整个过程的效率。在本综述中,我们首先提供了一个通过计算机模拟技术研究传统药用植物的详细研究流程,并阐述其理论原理。我们还调查了可用于虚拟筛选和药理学网络构建的常见数据库、软件程序和网站工具。此外,我们以一个简单的例子结束,该例子说明了整个方法,并对这种计算机模拟方法的开发和应用提出了看法,以揭示传统药用植物作用效果的药理学基础。