Department of Plant and Microbial Biology, University of Zurich, Zurich, Switzerland.
Environ Microbiol. 2018 Oct;20(10):3629-3642. doi: 10.1111/1462-2920.14355. Epub 2018 Aug 16.
Many bacteria rely on the secretion of siderophores to scavenge iron from the environment. Laboratory studies revealed that abiotic and biotic factors together determine how much siderophores bacteria make, and whether siderophores can be exploited by non-producing cheaters or be deployed by producers to inhibit competitors. Here, we explore whether these insights apply to natural communities, by comparing the production of the siderophore pyoverdine among 930 Pseudomonas strains from 48 soil and pond communities. We found that pH, iron content, carbon concentration and community diversity determine pyoverdine production levels, and the extent to which strains are either stimulated or inhibited by heterologous (non-self) pyoverdines. While pyoverdine non-producers occurred in both habitats, their prevalence was higher in soils. Environmental and genetic analyses suggest that non-producers can evolve as cheaters, exploiting heterologous pyoverdine, but also due to pyoverdine disuse in environments with increased iron availability. Overall, we found that environmental factors explained between-strain variation in pyoverdine production much better in soils than in ponds, presumably because high strain mixing in ponds impedes local adaption. Our study sheds light on the complexity of natural bacterial communities, and provides first insights into the multivariate nature of siderophore-based iron acquisition and competition among environmental pseudomonads.
许多细菌依赖于铁载体的分泌来从环境中获取铁。实验室研究表明,非生物和生物因素共同决定了细菌产生多少铁载体,以及铁载体是否可以被非产生者利用的“骗子”利用,或者被生产者用来抑制竞争者。在这里,我们通过比较来自 48 个土壤和池塘群落的 930 株假单胞菌菌株中铁载体绿脓菌素的产生,来探索这些见解是否适用于自然群落。我们发现,pH 值、铁含量、碳浓度和群落多样性决定了绿脓菌素的产生水平,以及菌株受到异源(非自身)绿脓菌素刺激或抑制的程度。虽然绿脓菌素非生产者存在于两种生境中,但它们在土壤中的丰度更高。环境和遗传分析表明,非生产者可以作为“骗子”进化,利用异源绿脓菌素,但也由于在铁供应增加的环境中绿脓菌素的不使用。总的来说,我们发现,环境因素在土壤中比在池塘中更能解释绿脓菌素产生的菌株间变异,这可能是因为池塘中的高菌株混合阻碍了局部适应。我们的研究揭示了自然细菌群落的复杂性,并首次深入了解了基于铁载体的铁获取和环境假单胞菌之间竞争的多变量性质。