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Chromobacterium pseudoviolaceum Kämpfer et al. 2009 是 Chromobacterium violaceum Bergonzini 1880 的后定同物异名。

Chromobacterium pseudoviolaceum Kämpfer et al. 2009 is a later heterotypic synonym of Chromobacterium violaceum Bergonzini 1880.

机构信息

1​Institut für Angewandte Mikrobiologie, Justus-Liebig-Universität Giessen, D-35392 Giessen, Germany.

2​Biomedical Sciences, College of Graduate Studies and College of Veterinary Medicine, Midwestern University, Glendale, Arizona 85308, USA.

出版信息

Int J Syst Evol Microbiol. 2018 Sep;68(9):2967-2968. doi: 10.1099/ijsem.0.002930. Epub 2018 Jul 20.

Abstract

Published data on the genome sequences of Chromobacterium pseudoviolaceum LMG 3953 and Chromobacterium violaceum ATCC 12472 suggest that both isolates belong to the same species. Previous 16S rRNA gene sequence comparisons had demonstrated that these species share 99.9 % sequence similarity. Initial investigations of fatty acid patterns and substrate utilization had shown only a few differences between the type strains of both species. Despite the 47.5 % homology by DNA-DNA hybridization studies between these strains, in silico whole genome sequence comparisons have clearly demonstrated that OrthoANIu and Mash/MinHash values were >99.18 %. Molecular phylogeny based on the estimated phylogenetic positions of the published genome sequences of the two type strains, and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry analyses indicate that these strains are members of the same species. Due to priority of publication and validation of names, Chromobacterium pseudoviolaceum is reclassified as Chromobacterium violaceum.

摘要

已发表的 Chromobacterium pseudoviolaceum LMG 3953 和 Chromobacterium violaceum ATCC 12472 的基因组序列数据表明,这两个分离株属于同一物种。先前的 16S rRNA 基因序列比较表明,这两个物种的序列相似度为 99.9%。对脂肪酸模式和底物利用的初步研究表明,这两个物种的模式株之间只有少数差异。尽管这两个菌株的 DNA-DNA 杂交研究显示同源性为 47.5%,但基于全基因组序列的比较,OrthoANIu 和 Mash/MinHash 值均>99.18%。基于两个模式株已发表基因组序列的估计系统发育位置和基质辅助激光解吸/电离飞行时间质谱分析的分子系统发育表明,这些菌株是同一物种的成员。由于出版优先权和名称验证,Chromobacterium pseudoviolaceum 被重新分类为 Chromobacterium violaceum。

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