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来源于巴氏甲烷八叠球菌的过氧化物酶 P450 酶 CYP152K6 的结构和催化特性。

Structural and catalytic properties of the peroxygenase P450 enzyme CYP152K6 from Bacillus methanolicus.

机构信息

Centre for Synthetic Biology of Fine and Specialty Chemicals (SYNBIOCHEM), Manchester Institute of Biotechnology, School of Chemistry, The University of Manchester, Manchester M1 7DN, United Kingdom.

Department of Microbiology, Immunology and Biochemistry, University of Tennessee Health Science Center, Memphis, TN 38163, United States of America.

出版信息

J Inorg Biochem. 2018 Nov;188:18-28. doi: 10.1016/j.jinorgbio.2018.08.002. Epub 2018 Aug 3.

DOI:10.1016/j.jinorgbio.2018.08.002
PMID:30119014
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6167049/
Abstract

The CYP152 family of cytochrome P450 enzymes (P450s or CYPs) are bacterial peroxygenases that use hydrogen peroxide to drive hydroxylation and decarboxylation of fatty acid substrates. We have expressed and purified a novel CYP152 family member - CYP152K6 from the methylotroph Bacillus methanolicus MGA3. CYP152K6 was characterized using spectroscopic, analytical and structural methods. CYP152K6, like its peroxygenase counterpart P450 (CYP152B1) from Sphingomonas paucimobilis, does not undergo significant fatty acid-induced perturbation to the heme spectrum, with the exception of a minor Soret shift observed on binding dodecanoic acid. However, CYP152K6 purified from an E. coli expression system was crystallized and its structure was determined to 1.3 Å with tetradecanoic acid bound. No lipids were present in conditions used for crystallogenesis, and thus CYP152K6 must form a complex by incorporating the fatty acid from E. coli cells. Turnover studies with dodecanoic acid revealed several products, with 2-hydroxydodecanoic acid as the major product and much smaller quantities of 3-hydroxydodecanoic acid. Secondary turnover products were undec-1-en-1-ol, 2-hydroxydodec-2-enoic acid and 2,3-dihydroxydodecanoic acid. This is the first report of a 2,3-hydroxylated fatty acid product made by a peroxygenase P450, with the dihydroxylated product formed by CYP152K6-catalyzed 3-hydroxylation of 2-hydroxydodecanoic acid, but not by 2-hydroxylation of 3-hydroxydodecanoic acid.

摘要

细胞色素 P450(CYP)酶的 CYP152 家族是细菌过氧化物酶,它们使用过氧化氢来驱动脂肪酸底物的羟化和脱羧。我们已经从甲醇营养型芽孢杆菌 MGA3 中表达和纯化了一种新型 CYP152 家族成员 CYP152K6。使用光谱学、分析和结构方法对 CYP152K6 进行了表征。与来自鞘氨醇单胞菌的过氧化物酶 CYP152B1 一样,CYP152K6 不会因脂肪酸引起的血红素光谱发生显著变化,除了在结合十二烷酸时观察到轻微的 Soret 位移外。然而,从大肠杆菌表达系统纯化的 CYP152K6 被结晶,并在结合十四烷酸的情况下确定其结构为 1.3Å。在用于结晶的条件下没有存在脂质,因此 CYP152K6 必须通过从大肠杆菌细胞中纳入脂肪酸来形成复合物。用十二烷酸进行的周转率研究揭示了几种产物,其中 2-羟基十二烷酸是主要产物,而 3-羟基十二烷酸的量要小得多。次要的周转产物是十一烯-1-醇、2-羟基十二-2-烯酸和 2,3-二羟基十二烷酸。这是首例过氧化物酶 P450 产生的 2,3-羟基脂肪酸产物的报告,CYP152K6 催化的 2-羟基十二烷酸的 3-羟化作用形成了二羟基化产物,但不是由 3-羟基十二烷酸的 2-羟化作用形成的。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/63b0/6167049/794cef4a54e5/gr8.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/63b0/6167049/794cef4a54e5/gr8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/63b0/6167049/2a8e3f6d09f7/ga1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/63b0/6167049/6274781f4c96/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/63b0/6167049/22e6436876c3/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/63b0/6167049/7e714b3e1a4f/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/63b0/6167049/2313d44d9da3/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/63b0/6167049/c04cd3331780/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/63b0/6167049/3314c7b782e8/gr6.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/63b0/6167049/794cef4a54e5/gr8.jpg

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