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烯生产细胞色素 P450 OleTJE(CYP152L1)的结构和生化特性来自 Jeotgalicoccus sp. 8456 细菌。

Structure and biochemical properties of the alkene producing cytochrome P450 OleTJE (CYP152L1) from the Jeotgalicoccus sp. 8456 bacterium.

机构信息

Manchester Institute of Biotechnology, Faculty of Life Sciences, University of Manchester, Manchester M1 7DN, United Kingdom.

Department of Microbiology, Immunology and Biochemistry, University of Tennessee Health Science Center, Memphis, Tennessee 38163.

出版信息

J Biol Chem. 2014 Mar 7;289(10):6535-6550. doi: 10.1074/jbc.M113.527325. Epub 2014 Jan 18.

DOI:10.1074/jbc.M113.527325
PMID:24443585
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3945318/
Abstract

The production of hydrocarbons in nature has been documented for only a limited set of organisms, with many of the molecular components underpinning these processes only recently identified. There is an obvious scope for application of these catalysts and engineered variants thereof in the future production of biofuels. Here we present biochemical characterization and crystal structures of a cytochrome P450 fatty acid peroxygenase: the terminal alkene forming OleTJE (CYP152L1) from Jeotgalicoccus sp. 8456. OleTJE is stabilized at high ionic strength, but aggregation and precipitation of OleTJE in low salt buffer can be turned to advantage for purification, because resolubilized OleTJE is fully active and extensively dissociated from lipids. OleTJE binds avidly to a range of long chain fatty acids, and structures of both ligand-free and arachidic acid-bound OleTJE reveal that the P450 active site is preformed for fatty acid binding. OleTJE heme iron has an unusually positive redox potential (-103 mV versus normal hydrogen electrode), which is not significantly affected by substrate binding, despite extensive conversion of the heme iron to a high spin ferric state. Terminal alkenes are produced from a range of saturated fatty acids (C12-C20), and stopped-flow spectroscopy indicates a rapid reaction between peroxide and fatty acid-bound OleTJE (167 s(-1) at 200 μm H2O2). Surprisingly, the active site is highly similar in structure to the related P450BSβ, which catalyzes hydroxylation of fatty acids as opposed to decarboxylation. Our data provide new insights into structural and mechanistic properties of a robust P450 with potential industrial applications.

摘要

自然界中碳氢化合物的生成仅在有限的几种生物中得到了证实,而这些过程所必需的许多分子组成部分直到最近才被发现。这些催化剂及其工程变体在未来生物燃料的生产中具有明显的应用前景。在这里,我们介绍了一种细胞色素 P450 脂肪酸过氧化物酶的生化特征和晶体结构:来自 Jeotgalicoccus sp. 8456 的末端烯烃形成 OleTJE(CYP152L1)。OleTJE 在高离子强度下稳定,但在低盐缓冲液中聚集和沉淀的 OleTJE 可以转化为纯化的优势,因为重新溶解的 OleTJE 是完全活性的,并且与脂质广泛解离。OleTJE 能强烈结合一系列长链脂肪酸,配体自由和花生酸结合的 OleTJE 的结构揭示了 P450 活性位点预先形成了脂肪酸结合。OleTJE 的血红素铁具有异常正的氧化还原电位(相对于标准氢电极为-103 mV),尽管血红素铁大部分转化为高自旋三价铁状态,但它不受底物结合的显著影响。末端烯烃是由一系列饱和脂肪酸(C12-C20)产生的,停流光谱表明过氧化物和脂肪酸结合的 OleTJE 之间的快速反应(在 200 μm H2O2 下为 167 s(-1))。令人惊讶的是,活性位点的结构与相关的 P450BSβ非常相似,后者催化脂肪酸的羟化而不是脱羧。我们的数据为具有潜在工业应用的稳健 P450 的结构和机制特性提供了新的见解。