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通过随机5'-UTR序列优化大肠杆菌中人工姜黄素的生物合成以控制多酶途径

Optimization of Artificial Curcumin Biosynthesis in E. coli by Randomized 5'-UTR Sequences To Control the Multienzyme Pathway.

作者信息

Kang Sun-Young, Heo Kyung Taek, Hong Young-Soo

机构信息

Anticancer Agents Research Center , Korea Research Institute of Bioscience and Biotechnology (KRIBB) , 30 Yeongudanji-ro , Ochang-eup, Cheongju-si , Chungbuk 28116 , Korea.

Department of Biomolecular Science, KRIBB School of Bioscience , Korea University of Science and Technology (UST) , 217 Gajeong-ro , Yuseong-gu, Daejeon 34141 , Korea.

出版信息

ACS Synth Biol. 2018 Sep 21;7(9):2054-2062. doi: 10.1021/acssynbio.8b00198. Epub 2018 Sep 4.

DOI:10.1021/acssynbio.8b00198
PMID:30160937
Abstract

One of the optimization strategies of an artificial biosynthetic metabolic flux with a multienzyme pathway is when the enzyme concentrations are present at the appropriate ratios rather than at their maximum expression. Thus, many recent research efforts have focused on the development of tools that fine-tune the enzyme expression, and these research efforts have facilitated the search for the optimum balance between pathway expression and cell viability. However, the rational approach has some limitations in finding the most optimized expression ratio in in vivo systems. In our study, we focused on fine-tuning the expression level of a six-enzyme reaction for the artificial biosynthesis of curcumin by screening a library of 5'-untranslational region (UTR) sequence mutants made by a multiplex automatic genome engineering (MAGE) tool. From the screening results, a variant (6M08rv) showed about a 38.2-fold improvement in the production of curcumin compared to the parent strain, in which the calculated expression levels of 4-coumarate:CoA ligase (4CL) and phenyldiketide-CoA synthase (DCS), two of the six enzymes, were much lower than those of the parent strain.

摘要

具有多酶途径的人工生物合成代谢通量的优化策略之一是酶浓度以适当比例存在,而非处于其最大表达水平。因此,最近许多研究工作都集中在开发能够微调酶表达的工具上,这些研究工作推动了对途径表达与细胞活力之间最佳平衡的探索。然而,在体内系统中寻找最优化表达比例时,这种理性方法存在一些局限性。在我们的研究中,我们通过筛选由多重自动基因组工程(MAGE)工具构建的5'-非翻译区(UTR)序列突变体文库,着重微调用于姜黄素人工生物合成的六酶反应的表达水平。从筛选结果来看,一个变体(6M08rv)与亲本菌株相比,姜黄素产量提高了约38.2倍,其中六种酶中的两种,即4-香豆酸:辅酶A连接酶(4CL)和苯基二酮-CoA合酶(DCS)的计算表达水平远低于亲本菌株。

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