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用于氨基酸生产的酵母模块化途径重排

Modular Pathway Rewiring of Yeast for Amino Acid Production.

作者信息

Liu Quanli, Yu Tao, Campbell Kate, Nielsen Jens, Chen Yun

机构信息

Department of Biology and Biological Engineering, Chalmers University of Technology, Gothenburg, Sweden; Novo Nordisk Foundation Center for Biosustainability, Chalmers University of Technology, Gothenburg, Sweden.

Department of Biology and Biological Engineering, Chalmers University of Technology, Gothenburg, Sweden; Novo Nordisk Foundation Center for Biosustainability, Chalmers University of Technology, Gothenburg, Sweden; Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Kongens Lyngby, Denmark.

出版信息

Methods Enzymol. 2018;608:417-439. doi: 10.1016/bs.mie.2018.06.009. Epub 2018 Jul 31.

Abstract

Amino acids find various applications in biotechnology in view of their importance in the food, feed, pharmaceutical, and personal care industries as nutrients, additives, and drugs, respectively. For the large-scale production of amino acids, microbial cell factories are widely used and the development of amino acid-producing strains has mainly focused on prokaryotes Corynebacterium glutamicum and Escherichia coli. However, the eukaryote Saccharomyces cerevisiae is becoming an even more appealing microbial host for production of amino acids and derivatives because of its superior molecular and physiological features, such as amenable to genetic engineering and high tolerance to harsh conditions. To transform S. cerevisiae into an industrial amino acid production platform, the highly coordinated and multiple layers regulation in its amino acid metabolism should be relieved and reconstituted to optimize the metabolic flux toward synthesis of target products. This chapter describes principles, strategies, and applications of modular pathway rewiring in yeast using the engineering of l-ornithine metabolism as a paradigm. Additionally, detailed protocols for in vitro module construction and CRISPR/Cas-mediated pathway assembly are provided.

摘要

鉴于氨基酸在食品、饲料、制药和个人护理行业中分别作为营养物质、添加剂和药物的重要性,它们在生物技术中有着广泛的应用。对于氨基酸的大规模生产,微生物细胞工厂被广泛使用,并且产氨基酸菌株的开发主要集中在原核生物谷氨酸棒杆菌和大肠杆菌上。然而,真核生物酿酒酵母正成为生产氨基酸及其衍生物更具吸引力的微生物宿主,因为它具有卓越的分子和生理特性,例如易于进行基因工程操作以及对恶劣条件具有高耐受性。为了将酿酒酵母转化为工业氨基酸生产平台,需要解除并重新构建其氨基酸代谢中高度协调的多层调控,以优化代谢通量朝着目标产物的合成方向。本章以L-鸟氨酸代谢工程为例,描述了酵母中模块化途径重新布线的原理、策略和应用。此外,还提供了体外模块构建和CRISPR/Cas介导的途径组装的详细方案。

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