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转录组学和蛋白质组学分析揭示了长尾毒蝎毒液成分的多样性。

Transcriptomic and Proteomic Analyses Reveal the Diversity of Venom Components from the Vaejovid Scorpion .

机构信息

Departamento de Medicina Molecular y Bioprocesos, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Avenida Universidad 2001, Apartado Postal 510-3, Cuernavaca, Morelos 62210, Mexico.

Department of Integrative Biology, University of Wisconsin⁻Madison, Madison, WI 53706, USA.

出版信息

Toxins (Basel). 2018 Sep 5;10(9):359. doi: 10.3390/toxins10090359.

DOI:10.3390/toxins10090359
PMID:30189638
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6162517/
Abstract

To understand the diversity of scorpion venom, RNA from venomous glands from a sawfinger scorpion, , of the family Vaejovidae, was extracted and used for transcriptomic analysis. A total of 84,835 transcripts were assembled after Illumina sequencing. From those, 119 transcripts were annotated and found to putatively code for peptides or proteins that share sequence similarities with the previously reported venom components of other species. In accordance with sequence similarity, the transcripts were classified as potentially coding for 37 ion channel toxins; 17 host defense peptides; 28 enzymes, including phospholipases, hyaluronidases, metalloproteases, and serine proteases; nine protease inhibitor-like peptides; 10 peptides of the cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 protein superfamily; seven La1-like peptides; and 11 sequences classified as "other venom components". A mass fingerprint performed by mass spectrometry identified 204 components with molecular masses varying from 444.26 Da to 12,432.80 Da, plus several higher molecular weight proteins whose precise masses were not determined. The LC-MS/MS analysis of a tryptic digestion of the soluble venom resulted in the determination of 16,840 peptide sequences, 24 of which matched sequences predicted from the translated transcriptome. The database presented here increases our general knowledge of the biodiversity of venom components from neglected non-buthid scorpions.

摘要

为了了解蝎子毒液的多样性,我们从 Vaejovidae 科的锯指蝎()的毒腺中提取 RNA,并进行转录组分析。经过 Illumina 测序,共组装了 84835 条转录本。在这些转录本中,有 119 条被注释,并被推测为编码与其他物种先前报道的毒液成分具有序列相似性的肽或蛋白质。根据序列相似性,这些转录本被分类为可能编码 37 种离子通道毒素;17 种宿主防御肽;28 种酶,包括磷脂酶、透明质酸酶、金属蛋白酶和丝氨酸蛋白酶;9 种蛋白酶抑制剂样肽;10 种富含半胱氨酸的分泌蛋白、抗原 5 和与发病机制相关的 1 蛋白超家族肽;7 种 La1 样肽;以及 11 种被归类为“其他毒液成分”的序列。质谱法进行的分子量指纹图谱鉴定出了 204 种分子量从 444.26 Da 到 12432.80 Da 不等的成分,此外还有几种分子量较高的蛋白质,其精确分子量尚未确定。对可溶性毒液的胰蛋白酶消化进行的 LC-MS/MS 分析导致确定了 16840 条肽序列,其中 24 条与从翻译转录组预测的序列匹配。本数据库增加了我们对被忽视的非布特蝎子毒液成分生物多样性的一般认识。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f188/6162517/6a6d04e13e6c/toxins-10-00359-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f188/6162517/6f1d59406e70/toxins-10-00359-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f188/6162517/3f0c6cd9039d/toxins-10-00359-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f188/6162517/6677bb8fac68/toxins-10-00359-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f188/6162517/3fec240714f8/toxins-10-00359-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f188/6162517/67c1f72aa63e/toxins-10-00359-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f188/6162517/8dd8a337bb94/toxins-10-00359-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f188/6162517/515c8c5e58a4/toxins-10-00359-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f188/6162517/3ba1c86b2954/toxins-10-00359-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f188/6162517/6a6d04e13e6c/toxins-10-00359-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f188/6162517/6f1d59406e70/toxins-10-00359-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f188/6162517/3f0c6cd9039d/toxins-10-00359-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f188/6162517/6677bb8fac68/toxins-10-00359-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f188/6162517/3fec240714f8/toxins-10-00359-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f188/6162517/67c1f72aa63e/toxins-10-00359-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f188/6162517/8dd8a337bb94/toxins-10-00359-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f188/6162517/515c8c5e58a4/toxins-10-00359-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f188/6162517/3ba1c86b2954/toxins-10-00359-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f188/6162517/6a6d04e13e6c/toxins-10-00359-g009.jpg

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