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丛林快车是一个多功能的抑制系统,可实现紧密的转录控制。

Jungle Express is a versatile repressor system for tight transcriptional control.

机构信息

Joint BioEnergy Institute, Emeryville, CA, 94608, USA.

Institute of Botany, University of Basel, 4001, Basel, Switzerland.

出版信息

Nat Commun. 2018 Sep 6;9(1):3617. doi: 10.1038/s41467-018-05857-3.

Abstract

Tightly regulated promoters are essential for numerous biological applications, where strong inducibility, portability, and scalability are desirable. Current systems are often incompatible with large-scale fermentations due to high inducer costs and strict media requirements. Here, we describe the bottom-up engineering of 'Jungle Express', an expression system that enables efficient gene regulation in diverse proteobacteria. This system is guided by EilR, a multidrug-binding repressor with high affinity to its optimized operator and cationic dyes that act as powerful inducers at negligible costs. In E. coli, the engineered promoters exhibit minimal basal transcription and are inducible over four orders of magnitude by 1 µM crystal violet, reaching expression levels exceeding those of the strongest current bacterial systems. Further, we provide molecular insights into specific interactions of EilR with its operator and with two inducers. The versatility of Jungle Express opens the way for tightly controlled and efficient gene expression that is not restricted to host organism, substrate, or scale.

摘要

严格调控的启动子对于许多生物应用至关重要,这些应用需要强诱导性、可移植性和可扩展性。目前的系统由于诱导剂成本高和严格的培养基要求,往往不适合大规模发酵。在这里,我们描述了“丛林快车”(Jungle Express)表达系统的自下而上工程,该系统能够在多种变形菌中实现高效的基因调控。该系统受 EilR 指导,EilR 是一种多药物结合的阻遏物,对其优化的操纵子和阳离子染料具有高亲和力,后者以微不足道的成本作为强大的诱导物。在大肠杆菌中,工程化的启动子表现出最小的基础转录,并且可以被 1μM 结晶紫诱导超过四个数量级,表达水平超过了目前最强的细菌系统。此外,我们还提供了 EilR 与其操纵子和两种诱导剂之间特定相互作用的分子见解。Jungle Express 的多功能性为严格控制和高效的基因表达开辟了道路,不受宿主生物、底物或规模的限制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2820/6127294/91a43e2c18fe/41467_2018_5857_Fig1_HTML.jpg

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