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长链非编码RNA作为内源性靶标模拟物及其在植物低营养胁迫耐受性中的作用探索

Long Non-Coding RNAs as Endogenous Target Mimics and Exploration of Their Role in Low Nutrient Stress Tolerance in Plants.

作者信息

Borah Priyanka, Das Antara, Milner Matthew J, Ali Arif, Bentley Alison R, Pandey Renu

机构信息

Mineral Nutrition Laboratory, Division of Plant Physiology, ICAR-Indian Agricultural Research Institute, New Delhi 110 012, India.

Department of Biosciences, Jamia Millia Islamia, New Delhi 110025, India.

出版信息

Genes (Basel). 2018 Sep 14;9(9):459. doi: 10.3390/genes9090459.

Abstract

Long non-coding RNA (lncRNA) research in plants has recently gained momentum taking cues from studies in animals systems. The availability of next-generation sequencing has enabled genome-wide identification of lncRNA in several plant species. Some lncRNAs are inhibitors of microRNA expression and have a function known as target mimicry with the sequestered transcript known as an endogenous target mimic (eTM). The lncRNAs identified to date show diverse mechanisms of gene regulation, most of which remain poorly understood. In this review, we discuss the role of identified putative lncRNAs that may act as eTMs for nutrient-responsive microRNAs (miRNAs) in plants. If functionally validated, these putative lncRNAs would enhance current understanding of the role of lncRNAs in nutrient homeostasis in plants.

摘要

植物中的长链非编码RNA(lncRNA)研究近来从动物系统的研究中获取线索,从而得到了发展。新一代测序技术的出现使得在多个植物物种中能够进行全基因组范围的lncRNA鉴定。一些lncRNA是微小RNA(miRNA)表达的抑制剂,具有一种称为靶标模拟的功能,其中被隔离的转录本被称为内源性靶标模拟物(eTM)。迄今为止鉴定出的lncRNA显示出多样的基因调控机制,其中大多数仍了解甚少。在本综述中,我们讨论了已鉴定的假定lncRNA的作用,这些lncRNA可能作为植物中营养响应性微小RNA(miRNA)的eTM。如果经过功能验证,这些假定的lncRNA将增进我们目前对lncRNA在植物营养稳态中作用的理解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f2a9/6162444/f655b1b48476/genes-09-00459-g001.jpg

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