Kelly Government Solutions, Durham, North Carolina, 27709, USA.
Division of the National Toxicology Program, National Institute of Environmental Health Sciences, Research Triangle Park, North Carolina, 27709, USA.
Toxicol Sci. 2019 Jan 1;167(1):92-104. doi: 10.1093/toxsci/kfy258.
Over the past decade, the zebrafish is increasingly being used as a model to screen for chemical-mediated toxicities including developmental toxicity (DT) and neurotoxicity (NT). One of the major challenges is lack of harmonization in data analysis approaches, thereby posing difficulty in comparing findings across laboratories. To address this, we sought to establish a unified data analysis strategy for both DT and NT data, by adopting the benchmark concentration (BMC) analysis. There are two critical aspects in the BMC analysis: having a toxicity endpoint amenable for BMC and selecting a proper benchmark response (BMR) for the endpoint. For the former, in addition to the typical endpoints in NT assay (eg, hyper/hypo- response quantified by distance moved), we also used endpoints that assess the differences in movement patterns between chemical-treated embryos and control embryos. For the latter, we standardized the selection of BMR, which is analogous to minimum activity threshold, based on intrinsic response variations in the endpoint. When comparing our BMC results with a traditionally used LOAEL method (lowest-observed-adverse-effect level), we found high active compound concordance (100% for DT vs 74% for NT); generally, the BMC was more sensitive than LOAEL (no. of BMC more sensitive/no. of concordant active compounds, 43/50 for DT vs 16/26 for NT). Using the BMC with standardized toxicity endpoints and an appropriate BMR, we may now have a unified data-analysis approach to comparing results across different zebrafish datasets, for a better understanding of strengths and challenges when using the zebrafish as a screening tool.
在过去的十年中,斑马鱼越来越多地被用作筛选化学介导的毒性的模型,包括发育毒性 (DT) 和神经毒性 (NT)。主要挑战之一是数据分析方法缺乏协调,从而难以比较实验室之间的发现。为了解决这个问题,我们试图通过采用基准浓度 (BMC) 分析来为 DT 和 NT 数据建立统一的数据分析策略。BMC 分析有两个关键方面:具有适合 BMC 的毒性终点和为该终点选择适当的基准响应 (BMR)。对于前者,除了 NT 测定中的典型终点(例如,通过移动距离量化的高/低反应)之外,我们还使用了评估化学处理胚胎和对照胚胎之间运动模式差异的终点。对于后者,我们基于终点的固有反应变化,标准化了 BMR 的选择,BMR 类似于最小活性阈值。当将我们的 BMC 结果与传统使用的 LOAEL 方法(最低观察到的不良效应水平)进行比较时,我们发现活性化合物的一致性很高(DT 为 100%,NT 为 74%);一般来说,BMC 比 LOAEL 更敏感(BMC 更敏感的数量/具有活性的化合物数量,DT 为 43/50,NT 为 16/26)。使用具有标准化毒性终点和适当 BMR 的 BMC,我们现在可能有了一种统一的数据分析方法,可以比较不同斑马鱼数据集的结果,从而更好地了解使用斑马鱼作为筛选工具的优势和挑战。