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增强子 RNA 和 NFκB 依赖性 P300 对 ADAMDEC1 的调控。

Enhancer RNA and NFκB-dependent P300 regulation of ADAMDEC1.

机构信息

The Division of Allergy Immunology at The Children's Hospital of Philadelphia, 3615 Civic Center Blvd, Philadelphia, PA, 19104, United states.

The Department of Biomedical and Health informatics at the Children's Hospital of Philadelphia, 3535 Market St, Philadelphia, PA, 19104, United states.

出版信息

Mol Immunol. 2018 Nov;103:312-321. doi: 10.1016/j.molimm.2018.09.019. Epub 2018 Oct 20.

Abstract

We observed increased expression of ADAMDEC1 RNA in monocytes from patients with systemic lupus erythematosus. The precise role of ADAMDEC1 is uncertain and uniquely among metalloproteinases it utilizes a zinc-coordinating aspartic acid residue which allows it to escape inhibition by tissue inhibitor of metalloprotease-3 (TIMP-3). A closely related gene encodes the protein ADAM28, which is not up-regulated in lupus. We leveraged the ability to look at both gene's promoters and enhancers simultaneously. ADAMDEC1 was up-regulated by LPS while ADAM28 was not upregulated in the short term. We identified MAP kinases and NFκB as critical cell pathways regulating the expression of ADAMDEC1. These same pathways were implicated in driving the expression of the ADAMDEC1 upstream enhancer RNAs. We demonstrated that binding of the enhancer RNAs produced from the upstream enhancer were critically important and that p300 bound to both the RNA from the enhancer and the DNA at the enhancer. P300 binding to the enhancer was dependent on NFκB. These data define the critical pathways regulating the expression of ADAMDEC1 and extend our knowledge of the roles of enhancer RNAs and mechanistically links p300 and enhancer RNAs.

摘要

我们观察到系统性红斑狼疮患者单核细胞中 ADAMDEC1 RNA 的表达增加。ADAMDEC1 的确切作用尚不确定,它是唯一一种利用锌协调天冬氨酸残基的金属蛋白酶,使其能够逃避金属蛋白酶组织抑制剂-3(TIMP-3)的抑制。一个密切相关的基因编码蛋白 ADAM28,它在狼疮中没有上调。我们利用同时观察两个基因的启动子和增强子的能力。ADAMDEC1 被 LPS 上调,而 ADAM28 在短期内没有上调。我们确定 MAP 激酶和 NFκB 是调节 ADAMDEC1 表达的关键细胞途径。这些相同的途径与驱动 ADAMDEC1 上游增强子 RNA 的表达有关。我们证明了来自上游增强子的增强子 RNA 的结合是至关重要的,并且 p300 结合到增强子的 RNA 和增强子处的 DNA。p300 与增强子的结合依赖于 NFκB。这些数据定义了调节 ADAMDEC1 表达的关键途径,并扩展了我们对增强子 RNA 作用的认识,并在机制上将 p300 和增强子 RNA 联系起来。

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Cell. 2017 Jan 12;168(1-2):135-149.e22. doi: 10.1016/j.cell.2016.12.020.
8
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Epigenetics. 2017 May 4;12(5):323-339. doi: 10.1080/15592294.2016.1265710. Epub 2016 Dec 2.
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