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Effects of organic acids on the formation of the barrier to radial oxygen loss in roots of Hordeum marinum.有机酸对海大麦根系径向氧损失屏障形成的影响。
Funct Plant Biol. 2014 Feb;41(2):187-202. doi: 10.1071/FP13178.
2
Low Light Availability Alters Root Exudation and Reduces Putative Beneficial Microorganisms in Seagrass Roots.低光照条件改变海草根分泌物并减少海草根中假定的有益微生物。
Front Microbiol. 2018 Jan 11;8:2667. doi: 10.3389/fmicb.2017.02667. eCollection 2017.
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Comparative Genomic Analysis of the Class and Proposed Reclassification to Epsilonbacteraeota (phyl. nov.).类的比较基因组分析及提议重新分类为埃普西隆杆菌门(新分类单元)。
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Microbial communities in sediment from patches, but not the leaf or root microbiomes, vary in relation to distance from patch edge.斑块沉积物中的微生物群落,而非叶片或根部的微生物群落,会因与斑块边缘的距离不同而有所变化。
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Global-Scale Structure of the Eelgrass Microbiome.鳗草微生物组的全球尺度结构
Appl Environ Microbiol. 2017 May 31;83(12). doi: 10.1128/AEM.03391-16. Print 2017 Jun 15.
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Microbiome Helper: a Custom and Streamlined Workflow for Microbiome Research.微生物组助手:一种用于微生物组研究的定制且简化的工作流程。
mSystems. 2017 Jan 3;2(1). doi: 10.1128/mSystems.00127-16. eCollection 2017 Jan-Feb.
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VSEARCH: a versatile open source tool for metagenomics.VSEARCH:一款用于宏基因组学的多功能开源工具。
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A taxonomic framework for cable bacteria and proposal of the candidate genera Electrothrix and Electronema.电缆细菌的分类框架以及候选属电丝菌属(Electrothrix)和电线虫属(Electronema)的提议。
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Motility of Electric Cable Bacteria.电缆细菌的运动性
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10
The globally widespread genus Sulfurimonas: versatile energy metabolisms and adaptations to redox clines.全球广泛分布的硫单胞菌属:多样的能量代谢及对氧化还原梯度的适应性
Front Microbiol. 2015 Sep 16;6:989. doi: 10.3389/fmicb.2015.00989. eCollection 2015.

海草根部的氧气损失与硫酸盐氧化缆线细菌的定殖同时发生,并减轻了硫化物的胁迫。

Oxygen loss from seagrass roots coincides with colonisation of sulphide-oxidising cable bacteria and reduces sulphide stress.

机构信息

School of Biological Sciences, The University of Western Australia, 35 Stirling Highway, Crawley, WA, 6009, Australia.

The UWA Oceans Institute, The University of Western Australia, 35 Stirling Highway, Crawley, WA, 6009, Australia.

出版信息

ISME J. 2019 Mar;13(3):707-719. doi: 10.1038/s41396-018-0308-5. Epub 2018 Oct 23.

DOI:10.1038/s41396-018-0308-5
PMID:30353038
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6461758/
Abstract

Seagrasses thrive in anoxic sediments where sulphide can accumulate to phytotoxic levels. So how do seagrasses persist in this environment? Here, we propose that radial oxygen loss (ROL) from actively growing root tips protects seagrasses from sulphide intrusion not only by abiotically oxidising sulphides in the rhizosphere of young roots, but also by influencing the abundance and spatial distribution of sulphate-reducing and sulphide-oxidising bacteria. We used a novel multifaceted approach combining imaging techniques (confocal fluorescence in situ hybridisation, oxygen planar optodes, and sulphide diffusive gradients in thin films) with microbial community profiling to build a complete picture of the microenvironment of growing roots of the seagrasses Halophila ovalis and Zostera muelleri. ROL was restricted to young root tips, indicating that seagrasses will have limited ability to influence sulphide oxidation in bulk sediments. On the microscale, however, ROL corresponded with decreased abundance of potential sulphate-reducing bacteria and decreased sulphide concentrations in the rhizosphere surrounding young roots. Furthermore, roots leaking oxygen had a higher abundance of sulphide-oxidising cable bacteria; which is the first direct observation of these bacteria on seagrass roots. Thus, ROL may enhance both abiotic and bacterial sulphide oxidation and restrict bacterial sulphide production around vulnerable roots, thereby helping seagrasses to colonise sulphide-rich anoxic sediments.

摘要

海草在缺氧沉积物中茁壮成长,而硫化物可能在这些沉积物中积累到对植物有毒的水平。那么,海草是如何在这种环境中生存的呢?在这里,我们提出,活跃生长的根尖的径向氧气损失(ROL)不仅通过非生物氧化年轻根系根际中的硫化物,而且通过影响硫酸盐还原菌和硫化物氧化菌的丰度和空间分布,来保护海草免受硫化物入侵。我们使用了一种新颖的多方面方法,结合成像技术(共聚焦荧光原位杂交、氧气平面光探头和硫化物薄膜扩散梯度)和微生物群落分析,构建了海草 Halophila ovalis 和 Zostera muelleri 生长根的完整微环境图。ROL 仅限于年轻的根尖,这表明海草将有限的能力影响大块沉积物中的硫化物氧化。然而,在微观尺度上,ROL 与年轻根系周围潜在硫酸盐还原菌的丰度降低和根际硫化物浓度降低相对应。此外,漏氧的根具有更高丰度的硫化物氧化电缆菌;这是首次直接观察到这些细菌在海草根上。因此,ROL 可能增强了非生物和细菌硫化物氧化,并限制了脆弱根系周围的细菌硫化物产生,从而帮助海草在富含硫化物的缺氧沉积物中定殖。