Li Chengcheng, Lin Fengming, Sun Wei, Yuan Shaoxun, Zhou Zhihua, Wu Fu-Gen, Chen Zhan
1State Key Laboratory of Bioelectronics, School of Biological Science and Medical Engineering, Southeast University, Nanjing, 210096 China.
Nanjing, China.
Biotechnol Biofuels. 2018 Oct 25;11:291. doi: 10.1186/s13068-018-1296-4. eCollection 2018.
In addition to its outstanding cellulase production ability, produces a wide variety of valuable secondary metabolites, the production of which has not received much attention to date. Among them, sorbicillinoids, a large group of hexaketide secondary metabolites derived from polyketides, are drawing a growing interest from researchers because they exhibit a variety of important biological functions, including anticancer, antioxidant, antiviral, and antimicrobial properties. The development of fungi strains with constitutive, hyperproduction of sorbicillinoids is thus desired for future industry application but is not well-studied. Moreover, although has been demonstrated to produce sorbicillinoids with the corresponding gene cluster and biosynthesis pathway proposed, the underlying molecular mechanism governing sorbicillinoid biosynthesis remains unknown.
Recombinant ZC121 was constructed from strain RUT-C30 by the insertion of the gene 12121-knockout cassette at the telomere of chromosome IV in consideration of the off-target mutagenesis encountered during the unsuccessful deletion of gene 121121. Strain ZC121, when grown on cellulose, showed a sharp reduction of cellulase production, but yet a remarkable enhancement of sorbicillinoids production as compared to strain RUT-C30. The hyperproduction of sorbicillinoids is a constitutive process, independent of culture conditions such as carbon source, light, pH, and temperature. To the best of our knowledge, strain ZC121 displays record sorbicillinoid production levels when grown on both glucose and cellulose. Sorbicillinol and bisvertinolone are the two major sorbicillinoid compounds produced. ZC121 displayed a different morphology and markedly reduced sporulation compared to RUT-C30 but had a similar growth rate and biomass. Transcriptome analysis showed that most genes involved in cellulase production were downregulated significantly in ZC121 grown on cellulose, whereas remarkably all genes in the sorbicillinoid gene cluster were upregulated on both cellulose and glucose.
A constitutive sorbicillinoid-hyperproduction strain ZC121 was obtained by off-target mutagenesis, displaying an overwhelming shift from cellulase production to sorbicillinoid production on cellulose, leading to a record for sorbicillinoid production. For the first time, degraded cellulose to produce platform chemical compounds other than protein in high yield. We propose that the off-target mutagenesis occurring at the telomere region might cause chromosome remodeling and subsequently alter the cell structure and the global gene expression pattern of strain ZC121, as shown by phenotype profiling and comparative transcriptome analysis of ZC121. Overall, ZC121 holds great promise for the industrial production of sorbicillinoids and serves as a good model to explore the regulation mechanism of sorbicillinoids' biosynthesis.
除了其出色的纤维素酶生产能力外,[具体菌株名称未给出]还能产生多种有价值的次级代谢产物,但其生产至今尚未受到太多关注。其中,山梨素类化合物是一大类源自聚酮化合物的六酮次级代谢产物,由于它们具有多种重要的生物学功能,包括抗癌、抗氧化、抗病毒和抗菌特性,因此越来越受到研究人员的关注。因此,开发能够组成型超量生产山梨素类化合物的真菌菌株对于未来的工业应用具有重要意义,但目前对此研究较少。此外,尽管已经证明[具体菌株名称未给出]能够产生山梨素类化合物,并提出了相应的基因簇和生物合成途径,但其调控山梨素类化合物生物合成的潜在分子机制仍然未知。
考虑到在基因121121缺失失败过程中遇到的脱靶诱变问题,通过在IV号染色体端粒处插入基因12121敲除盒,从菌株RUT - C30构建了重组菌株ZC121。当在纤维素上生长时,与菌株RUT - C30相比,菌株ZC121的纤维素酶产量急剧下降,但山梨素类化合物的产量却显著提高。山梨素类化合物的超量生产是一个组成型过程,与碳源、光照、pH值和温度等培养条件无关。据我们所知,菌株ZC121在葡萄糖和纤维素上生长时,山梨素类化合物的产量均创纪录。山梨醇和双环氧维罗酮是产生的两种主要山梨素类化合物。与RUT - C30相比,ZC121呈现出不同的形态,孢子形成明显减少,但生长速率和生物量相似。转录组分析表明,在纤维素上生长的ZC121中,大多数参与纤维素酶生产的基因显著下调,而在纤维素和葡萄糖上,山梨素类化合物基因簇中的所有基因均显著上调。
通过脱靶诱变获得了组成型山梨素类化合物超量生产菌株ZC121,该菌株在纤维素上从纤维素酶生产向山梨素类化合物生产发生了压倒性转变,从而创造了山梨素类化合物产量的纪录。首次实现了[具体菌株名称未给出]将纤维素高效降解为除蛋白质以外的平台化合物。我们认为,发生在端粒区域的脱靶诱变可能导致染色体重塑,进而改变菌株ZC121的细胞结构和全局基因表达模式,这已通过ZC121的表型分析和比较转录组分析得到证实。总体而言,ZC121在山梨素类化合物的工业生产方面具有巨大潜力,并且是探索山梨素类化合物生物合成调控机制的良好模型。