Lee Sang Hoon, Lee YeonJoo, Park Jong Sun, Cho Young-Jae, Yoon Ho Il, Lee Choon-Taek, Lee Jae Ho
Division of Pulmonology, Department of Internal Medicine, Severance Hospital, Institute of Chest Diseases, Yonsei University College of Medicine, Seoul 120-752, Korea.
Division of Pulmonary and Critical Care Medicine, Department of Internal Medicine Seoul National University Bundang Hospital, 82 Gumi-ro, 173 Beon-gil, Bundang-gu, Seongnam-si, Gyeonggi-do 463-707, Korea.
J Clin Med. 2018 Nov 9;7(11):429. doi: 10.3390/jcm7110429.
The applications of the 16S rRNA gene pyrosequencing has expanded our knowledge of the respiratory tract microbiome originally obtained using conventional, culture-based methods. In this study, we employed DNA-based molecular techniques for examining the sputum microbiome in bronchiectasis patients, in relation to disease severity. Of the sixty-three study subjects, forty-two had mild and twenty-one had moderate or severe bronchiectasis, which was classified by calculating the FACED score, based on the FEV₁ (forced expiratory volume in 1 s, %) (F, 0⁻2 points), age (A, 0⁻2 points), chronic colonization by (C, 0⁻1 point), radiographic extension (E, 0⁻1 point), and dyspnoea (D, 0⁻1 point). Bronchiectasis was defined as mild, at 0⁻2 points, moderate at 3⁻4 points, and severe at 5⁻7 points. The mean age was 68.0 ± 9.3 years; thirty-three patients were women. ( = 0.005) and ( = 0.043) were significantly more abundant in the mild bronchiectasis group, whereas ( = 0.031) was significantly more abundant in the moderate or severe group. However, in terms of the alpha and beta diversity, the sputum microbiota of the two groups did not significantly differ, i.e., the same dominant genera were found in all samples. Further large-scale studies are needed to investigate the sputum microbiome in bronchiectasis.
16S rRNA基因焦磷酸测序技术的应用拓展了我们对呼吸道微生物群的认识,这些认识最初是通过传统的基于培养的方法获得的。在本研究中,我们采用基于DNA的分子技术来检测支气管扩张症患者痰液中的微生物群,并分析其与疾病严重程度的关系。在63名研究对象中,42人患有轻度支气管扩张症,21人患有中度或重度支气管扩张症。支气管扩张症的严重程度是通过计算FACED评分来分类的,该评分基于第1秒用力呼气容积(FEV₁,%)(F,0至2分)、年龄(A,0至2分)、铜绿假单胞菌慢性定植情况(C,0至1分)、影像学病变范围(E,0至1分)和呼吸困难(D,0至1分)。支气管扩张症的严重程度分类为:0至2分为轻度,3至4分为中度,5至7分为重度。研究对象的平均年龄为68.0±9.3岁;33名患者为女性。轻度支气管扩张症组中,嗜麦芽窄食单胞菌(p = 0.005)和土生拉乌尔菌(p = 0.043)的丰度显著更高,而中度或重度组中洋葱伯克霍尔德菌(p = 0.031)的丰度显著更高。然而,就α多样性和β多样性而言,两组痰液微生物群没有显著差异,即在所有样本中都发现了相同的优势菌属。需要进一步开展大规模研究来调查支气管扩张症患者的痰液微生物群。