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一种新型嗜碱菌抑制ESKAPE病原体。

A Novel Alkaliphilic Inhibits ESKAPE Pathogens.

作者信息

Terra Luciana, Dyson Paul J, Hitchings Matthew D, Thomas Liam, Abdelhameed Alyaa, Banat Ibrahim M, Gazze Salvatore A, Vujaklija Dušica, Facey Paul D, Francis Lewis W, Quinn Gerry A

机构信息

Institute of Life Sciences, Swansea University Medical School, Swansea, United Kingdom.

School of Biomedical Sciences, Ulster University, Coleraine, United Kingdom.

出版信息

Front Microbiol. 2018 Oct 16;9:2458. doi: 10.3389/fmicb.2018.02458. eCollection 2018.

Abstract

In an effort to stem the rising tide of multi-resistant bacteria, researchers have turned to niche environments in the hope of discovering new varieties of antibiotics. We investigated an ethnopharmacological (cure) from an alkaline/radon soil in the area of Boho, in the Fermanagh Scarplands (N. Ireland) for the presence of , a well-known producer of antibiotics. From this soil we isolated a novel (closest relative 57% of genome relatedness) sp. capable of growth at high alkaline pH (10.5) and tolerant of gamma radiation to 4 kGy. Genomic sequencing identified many alkaline tolerance (antiporter/multi-resistance) genes compared to M145 (at 3:1), hence we designated the strain sp. myrophorea, isolate McG1, from the Greek, myro (fragrance) and phorea (porter/carrier). tests demonstrated the ability of the sp. myrophorea, isolate McG1 to inhibit the growth of many strains of ESKAPE pathogens; most notably carbapenem-resistant (a critical pathogen on the WHO priority list of antibiotic-resistant bacteria), vancomycin-resistant , and methicillin-resistant (both listed as high priority pathogens). Further prediction of antimicrobial potential of sp. myrophorea, isolate McG1 by anti-SMASH and RAST software identified many secondary metabolite and toxicity resistance gene clusters (45 and 27, respectively) as well as many antibiotic resistance genes potentially related to antibiotic production. Follow-up tests show that the sp. myrophorea, isolate McG1 was resistant to 28 out of 36 clinical antibiotics. Although not a comprehensive analysis, we think that some of the Boho soils' reputed curative properties may be linked to the ability of sp. myrophorea, isolate McG1 to inhibit ESKAPE pathogens. More importantly, further analysis may elucidate other key components that could alleviate the tide of multi-resistant nosocomial infections.

摘要

为了遏制多重耐药菌不断上升的趋势,研究人员将目光投向了一些特殊环境,希望能发现新的抗生素品种。我们对北爱尔兰弗马纳格高地博霍地区碱性/含氡土壤中的一种民族药理学(疗法)进行了调查,以寻找著名的抗生素生产者。从这种土壤中,我们分离出了一种新型(与最接近的亲缘种基因组相关性为57%)的菌株,它能够在高碱性pH值(10.5)下生长,并且耐受4千戈瑞的伽马辐射。与枯草芽孢杆菌M145相比,基因组测序鉴定出许多耐碱性(反向转运蛋白/多重耐药)基因(比例为3:1),因此我们将该菌株命名为嗜香芽孢杆菌Myrophorea sp.,分离株McG1,名称源自希腊语myro(香味)和phorea(搬运工/载体)。实验证明,嗜香芽孢杆菌Myrophorea sp.,分离株McG1能够抑制许多ESKAPE病原体菌株的生长;最显著的是耐碳青霉烯类鲍曼不动杆菌(世界卫生组织抗生素耐药细菌优先清单上的关键病原体)、耐万古霉素肠球菌以及耐甲氧西林金黄色葡萄球菌(均被列为高优先级病原体)。通过anti - SMASH和RAST软件对嗜香芽孢杆菌Myrophorea sp.,分离株McG1的抗菌潜力进行的进一步预测,鉴定出许多次生代谢物和毒性抗性基因簇(分别为45个和27个)以及许多可能与抗生素生产相关的抗生素抗性基因。后续实验表明,嗜香芽孢杆菌Myrophorea sp.,分离株McG1对36种临床抗生素中的28种具有抗性。虽然这并非全面分析,但我们认为博霍土壤一些所谓的治疗特性可能与嗜香芽孢杆菌Myrophorea sp.分离株McG1抑制ESKAPE病原体的能力有关。更重要的是,进一步分析可能会阐明其他关键成分,从而缓解多重耐药医院感染的趋势。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/907d/6232825/0b2e5a30e561/fmicb-09-02458-g001.jpg

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