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溶菌多糖单加氧酶的生产与光谱表征

Production and spectroscopic characterization of lytic polysaccharide monooxygenases.

作者信息

Hemsworth Glyn R, Ciano Luisa, Davies Gideon J, Walton Paul H

机构信息

School of Molecular and Cellular Biology, Faculty of Biological Sciences, University of Leeds, Leeds, United Kingdom; Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds, United Kingdom.

Department of Chemistry, University of York, York, United Kingdom.

出版信息

Methods Enzymol. 2018;613:63-90. doi: 10.1016/bs.mie.2018.10.014. Epub 2018 Nov 15.

DOI:10.1016/bs.mie.2018.10.014
PMID:30509474
Abstract

Lytic polysaccharide monooxygenases (LPMOs, also known as PMOs) are a recently discovered family of enzymes that play a key role in the breakdown of polysaccharide substrates. The ability of LPMOs to introduce chain breaks, using an oxidative mechanism, has particularly attracted attention as the world seeks more cost-effective and environmentally friendly ways of producing second-generation biofuels for the future. LPMOs are copper-dependent enzymes and have an unusual active site which includes the N-terminal residue of the protein in the copper coordination sphere. This N-terminal histidine side chain is also methylated in fungal enzymes, the molecular reason for which is still a debated topic. The production of these enzymes poses several challenges if we are to understand their chemical mechanisms. Here, we describe the methods that have been used in the field to produce LPMOs and provide information on the workflows that we use for our electron paramagnetic resonance (EPR) spectroscopy experiments. EPR has been a particularly powerful tool in the study of these enzymes and our objective with this chapter is to provide some helpful information for researchers for whom this technique might be daunting or theoretically difficult to access.

摘要

裂解多糖单加氧酶(LPMO,也称为PMO)是最近发现的一类酶,在多糖底物的分解中起关键作用。随着世界寻求更具成本效益和环境友好的方式来生产未来的第二代生物燃料,LPMO利用氧化机制引入链断裂的能力尤其受到关注。LPMO是依赖铜的酶,具有一个不寻常的活性位点,该位点在铜配位球中包括蛋白质的N端残基。在真菌酶中,这个N端组氨酸侧链也会被甲基化,其分子原因仍是一个有争议的话题。如果我们要了解这些酶的化学机制,其生产会带来几个挑战。在这里,我们描述了该领域用于生产LPMO的方法,并提供了我们用于电子顺磁共振(EPR)光谱实验的工作流程信息。EPR在这些酶的研究中一直是一个特别强大的工具,本章的目的是为那些可能觉得这项技术令人生畏或理论上难以掌握的研究人员提供一些有用的信息。

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引用本文的文献

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Inorg Chem. 2022 May 23;61(20):8022-8035. doi: 10.1021/acs.inorgchem.2c00766. Epub 2022 May 12.
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Mechanistic basis of substrate-O coupling within a chitin-active lytic polysaccharide monooxygenase: An integrated NMR/EPR study.一种几丁质活性溶菌多糖单加氧酶中底物-O 偶联的作用机制:NMR/EPR 综合研究。
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3
Formation of a Copper(II)-Tyrosyl Complex at the Active Site of Lytic Polysaccharide Monooxygenases Following Oxidation by HO.
活性位点中单加氧酶氧化 HO 后形成的铜(II)-酪氨酸配合物
J Am Chem Soc. 2019 Nov 20;141(46):18585-18599. doi: 10.1021/jacs.9b09833. Epub 2019 Nov 12.
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Biotechnol Biofuels. 2019 Mar 19;12:58. doi: 10.1186/s13068-019-1392-0. eCollection 2019.