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基于16S rRNA基因扩增子数据集的班公错湖（喜马拉雅西北部高海拔草原湖泊）水-土样本中的细菌多样性

16S rRNA Gene Amplicon Data Set-Based Bacterial Diversity in a Water-Soil Sample from Pangong Tso Lake, a High-Altitude Grassland Lake of the Northwest Himalayas.

作者信息

Bisht Garima, Sourirajan Anuradha, Baumler David J, Dev Kamal

机构信息

Faculty of Applied Sciences and Biotechnology, Shoolini University, Solan, Himachal Pradesh, India.

Department of Food Science and Nutrition, University of Minnesota-Twin Cities, St. Paul, Minnesota, USA.

出版信息

Microbiol Resour Announc. 2018 Nov 1;7(17). doi: 10.1128/MRA.01192-18. eCollection 2018 Nov.

DOI:10.1128/MRA.01192-18
PMID:30533766
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6256501/
Abstract

We report here 16S rRNA-based bacterial diversity existing during freezing conditions in a high-altitude Himalayan lake through sequencing a 16S rRNA gene amplicon data set. A total of 121,857 high-quality reads were obtained; 40.78% of the bacterial population was classified to the genus level, while 1.26% was classified to the species level.

摘要

我们通过对16S rRNA基因扩增子数据集进行测序，报告了喜马拉雅高海拔湖泊在冰冻条件下基于16S rRNA的细菌多样性。总共获得了121,857条高质量读数；40.78%的细菌种群被分类到属水平，而1.26%被分类到种水平。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d731/6256501/9de4a30cab7c/mra9991802580001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d731/6256501/9de4a30cab7c/mra9991802580001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d731/6256501/9de4a30cab7c/mra9991802580001.jpg

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