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用于木质素生物转化的耐酚菌株的脂质代谢

Lipid metabolism of phenol-tolerant strains for lignin bioconversion.

作者信息

Henson William R, Hsu Fong-Fu, Dantas Gautam, Moon Tae Seok, Foston Marcus

机构信息

1Department of Energy, Environmental and Chemical Engineering, Washington University in St. Louis, St. Louis, MO 63130 USA.

2Mass Spectrometry Resource, Division of Endocrinology, Diabetes, Metabolism, and Lipid Research, Department of Internal Medicine, Washington University School of Medicine, St. Louis, MO 63110 USA.

出版信息

Biotechnol Biofuels. 2018 Dec 28;11:339. doi: 10.1186/s13068-018-1337-z. eCollection 2018.

Abstract

BACKGROUND

Lignin is a recalcitrant aromatic polymer that is a potential feedstock for renewable fuel and chemical production. PD630 is a promising strain for the biological upgrading of lignin due to its ability to tolerate and utilize lignin-derived aromatic compounds. To enhance its aromatic tolerance, we recently applied adaptive evolution using phenol as a sole carbon source and characterized a phenol-adapted strain (evol40) and the wild-type (WT) strain by whole genome and RNA sequencing. While this effort increased our understanding of the aromatic tolerance, the tolerance mechanisms were not completely elucidated.

RESULTS

We hypothesize that the composition of lipids plays an important role in phenol tolerance. To test this hypothesis, we applied high-resolution mass spectrometry analysis to lipid samples obtained from the WT and evol40 strains grown in 1 g/L glucose (glucose), 0.75 g/L phenol (low phenol), or 1.5 g/L phenol (high phenol, evol40 only) as a sole carbon source. This analysis identified > 100 lipid species of mycolic acids, phosphatidylethanolamines (PEs), phosphatidylinositols (PIs), and triacylglycerols. In both strains, mycolic acids had fewer double bond numbers in phenol conditions than the glucose condition, and evol40 had significantly shorter mycolic acid chain lengths than the WT strain in phenol conditions. These results indicate that phenol adaptation affected mycolic acid membrane composition. In addition, the percentage of unsaturated phospholipids decreased for both strains in phenol conditions compared to the glucose condition. Moreover, the PI content increased for both strains in the low phenol condition compared to the glucose condition, and the PI content increased further for evol40 in the high phenol condition relative to the low phenol condition.

CONCLUSIONS

This work represents the first comprehensive lipidomic study on the membrane of grown using phenol as a sole carbon source. Our results suggest that the alteration of the mycolic acid and phospholipid membrane composition may be a strategy of for phenol tolerance.

摘要

背景

木质素是一种难降解的芳香聚合物,是可再生燃料和化学生产的潜在原料。PD630因其能够耐受和利用木质素衍生的芳香化合物,是木质素生物升级的一种有前景的菌株。为了增强其对芳香化合物的耐受性,我们最近以苯酚作为唯一碳源进行适应性进化,并通过全基因组和RNA测序对苯酚适应菌株(evol40)和野生型(WT)菌株进行了表征。虽然这项工作增加了我们对芳香耐受性的理解,但耐受机制尚未完全阐明。

结果

我们假设脂质组成在苯酚耐受性中起重要作用。为了验证这一假设,我们对从以1 g/L葡萄糖(葡萄糖)、0.75 g/L苯酚(低苯酚)或1.5 g/L苯酚(仅evol40的高苯酚)作为唯一碳源生长的WT和evol40菌株获得的脂质样品进行了高分辨率质谱分析。该分析鉴定出超过100种分枝菌酸、磷脂酰乙醇胺(PE)、磷脂酰肌醇(PI)和三酰甘油的脂质种类。在两种菌株中,苯酚条件下的分枝菌酸双键数量均少于葡萄糖条件,并且在苯酚条件下,evol40的分枝菌酸链长度明显短于WT菌株。这些结果表明苯酚适应影响了分枝菌酸膜组成。此外,与葡萄糖条件相比,两种菌株在苯酚条件下不饱和磷脂的百分比均降低。此外,与葡萄糖条件相比,两种菌株在低苯酚条件下的PI含量均增加,并且相对于低苯酚条件,evol40在高苯酚条件下的PI含量进一步增加。

结论

这项工作代表了首次对以苯酚作为唯一碳源生长的菌株膜进行的全面脂质组学研究。我们的结果表明,分枝菌酸和磷脂膜组成的改变可能是该菌株耐受苯酚的一种策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8ae/6309088/dc98226aaf31/13068_2018_1337_Fig1_HTML.jpg

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