Department of Pharmacology and Experimental Neuroscience, College of Medicine, University of Nebraska Medical Center, Omaha, NE, USA.
Bioinformatics and Systems Biology Core, University of Nebraska Medical Center, Omaha, NE, USA.
Database (Oxford). 2019 Jan 1;2019:bay134. doi: 10.1093/database/bay134.
Herein we present major updates to the National NeuroAIDS Tissue Consortium (NNTC) database. The NNTC's ongoing multisite clinical research study was established to facilitate access to ante-mortem and post-mortem data, tissues and biofluids for the neurohuman immunodeficiency virus (HIV) research community. Recently, the NNTC has expanded to include data from the central nervous system HIV Antiretroviral Therapy Effects Research (CHARTER) study. The data and biospecimens from CHARTER and NNTC cohorts are available to qualified researchers upon request. Data generated by requestors using NNTC biospecimens and tissues are returned to the NNTC upon the conclusion of requestors' work, and this external, experimental data are annotated and curated in the publically accessible NNTC database, thereby extending the utility of each case. A flexible and extensible database ontology allows the integration of disparate data sets, including external experimental data, clinical neuropsychological and neuromedical testing data, tissue pathology and neuroimaging data.
在此,我们介绍了国家神经艾滋病组织联盟 (NNTC) 数据库的主要更新。NNTC 正在进行的多地点临床研究旨在为神经人类免疫缺陷病毒 (HIV) 研究界提供获取生前和死后数据、组织和生物流体的途径。最近,NNTC 已扩展到包括来自中枢神经系统 HIV 抗逆转录病毒治疗效果研究 (CHARTER) 的数据。CHARTER 和 NNTC 队列的数据和生物样本可根据要求提供给合格的研究人员。请求者使用 NNTC 生物样本和组织生成的数据在请求者工作结束时返回 NNTC,并且这些外部实验数据在公共可访问的 NNTC 数据库中进行注释和整理,从而扩展了每个案例的用途。灵活可扩展的数据库本体允许整合不同的数据集,包括外部实验数据、临床神经心理学和神经医学测试数据、组织病理学和神经影像学数据。