University of Stuttgart, Institute of Biomaterials and Biomolecular Systems, Department of Plant Biotechnology, Pfaffenwaldring 57, 70569 Stuttgart, Germany.
Ludwig-Maximilians-University Munich, Department Biology I, Plant Evolutionary Cell Biology, Großhaderner Str. 2-4, 82152 Planegg-Martinsried, Germany.
NPJ Syst Biol Appl. 2019 Jan 24;5:4. doi: 10.1038/s41540-018-0080-1. eCollection 2019.
We developed a mathematical model to simulate dynamics of central carbon metabolism over complete diurnal cycles for leaves of exposed to either normal (120 µmol m s) or high light intensities (1200 µmol m s). The main objective was to obtain a high-resolution time series for metabolite dynamics as well as for shoot structural carbon formation (compounds with long residence time) and assimilate export of aerial organs to the sink tissue. Model development comprised a stepwise increment of complexity to finally approach the situation. The correct allocation of assimilates to either sink export or shoot structural carbon formation was a central goal of model development. Diurnal gain of structural carbon was calculated based on the daily increment in total photosynthetic carbon fixation, and this was the only parameter for structural carbon formation implemented in the model. Simulations of the dynamics of central metabolite pools revealed that shoot structural carbon formation occurred solely during the light phase but not during the night. The model allowed simulation of shoot structural carbon formation as a function of central leaf carbon metabolism under different environmental conditions without structural modifications. Model simulations were performed for the accession Landsberg (Ler) and its hexokinase null-mutant . This mutant displays a slow growth phenotype especially at increasing light intensities. Comparison of simulations revealed that the retarded shoot growth in the mutant resulted from an increased assimilate transport to sink organs. Due to its central function in sucrose cycling and sugar signaling, our findings suggest an important role of hexokinase-1 for carbon allocation to either shoot growth or assimilate export.
我们开发了一个数学模型,以模拟暴露在正常(120μmol·m-2·s-1)或高光强(1200μmol·m-2·s-1)下的叶片整个日周期中碳代谢的动态。主要目的是获得高分辨率的代谢物动态以及茎结构碳形成(具有长停留时间的化合物)和地上器官同化产物向汇组织的输出时间序列。模型的开发包括逐步增加复杂性,最终接近现实情况。同化产物向汇出口或茎结构碳形成的正确分配是模型开发的核心目标。根据总光合碳固定的日增量计算结构碳的日增益,这是模型中唯一用于结构碳形成的参数。中心代谢物库动态的模拟表明,茎结构碳的形成仅发生在光照阶段,而不是在夜间。该模型允许在不同环境条件下模拟中心叶片碳代谢下的茎结构碳形成,而无需结构修改。模型模拟分别在莱格(Ler)及其己糖激酶缺失突变体中进行。该突变体在高光强下表现出生长缓慢的表型。模拟结果比较表明,突变体中茎生长的延迟是由于向汇器官运输的同化产物增加所致。由于己糖激酶-1在蔗糖循环和糖信号转导中的核心作用,我们的研究结果表明,它在将碳分配到茎生长或同化产物输出方面起着重要作用。