Department of Molecular and Cell Biology, Leicester Institute of Structural and Chemical Biology, University of Leicester, UK.
FEBS J. 2019 Jun;286(11):2035-2042. doi: 10.1111/febs.14771. Epub 2019 Feb 14.
NMR is one of the major techniques for investigating the structure, dynamics and interactions between biomolecules. However, non-experts often experience NMR experimentation and data analysis as intimidating. We discuss a simple yet powerful NMR technique, the so-called chemical shift perturbation (CSP) analysis, as a tool to elucidate macromolecular interactions in small- and medium-sized complexes, including protein-protein, protein-drug, and protein-DNA/RNA interactions. We discuss current software packages for NMR data analysis and present a new interactive graphical tool implemented in CcpNmr AnalysisAssign version-3, which can drastically reduce the time required for the CSP analysis. Lastly, we illustrate the usefulness of a protein three-dimensional structure for interpretation of the CSP data.
NMR 是研究生物分子结构、动态和相互作用的主要技术之一。然而,非专业人士通常认为 NMR 实验和数据分析具有挑战性。我们讨论了一种简单而强大的 NMR 技术,即所谓的化学位移扰动(CSP)分析,作为阐明小分子和中等大小复合物中大分子相互作用的工具,包括蛋白质-蛋白质、蛋白质-药物和蛋白质-DNA/RNA 相互作用。我们讨论了当前用于 NMR 数据分析的软件包,并介绍了在 CcpNmr AnalysisAssign version-3 中实现的新的交互式图形工具,该工具可以大大减少 CSP 分析所需的时间。最后,我们说明了蛋白质三维结构对于解释 CSP 数据的有用性。