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用实验和分子动力学研究单壁碳纳米管和石墨烯片与蛋白 G 的非共价功能化

An investigation into non-covalent functionalization of a single-walled carbon nanotube and a graphene sheet with protein G:A combined experimental and molecular dynamics study.

机构信息

Department of Medical Physics and Biomedical Engineering, School of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran.

Department of Biology, Science and Research Branch, Islamic Azad University, Tehran, Iran.

出版信息

Sci Rep. 2019 Feb 4;9(1):1273. doi: 10.1038/s41598-018-37311-1.

Abstract

Investigation of non-covalent interaction of hydrophobic surfaces with the protein G (PrG) is necessary due to their frequent utilization in immunosensors and ELISA. It has been confirmed that surfaces, including carbonous-nanostructures (CNS) could orient proteins for a better activation. Herein, PrG interaction with single-walled carbon nanotube (SWCNT) and graphene (Gra) nanostructures was studied by employing experimental and MD simulation techniques. It is confirmed that the PrG could adequately interact with both SWCNT and Gra and therefore fine dispersion for them was achieved in the media. Results indicated that even though SWCNT was loaded with more content of PrG in comparison with the Gra, the adsorption of the PrG on Gra did not induce significant changes in the IgG tendency. Several orientations of the PrG were adopted in the presence of SWCNT or Gra; however, SWCNT could block the PrG-FcR. Moreover, it was confirmed that SWCNT reduced the α-helical structure content in the PrG. Reduction of α-helical structure of the PrG and improper orientation of the PrG-SWCNT could remarkably decrease the PrG tendency to the Fc of the IgG. Importantly, the Gra could appropriately orient the PrG by both exposing the PrG-FcR and also by blocking the fragment of the PrG that had tendency to interact with Fab in IgG.

摘要

由于其在免疫传感器和 ELISA 中的频繁应用,研究疏水性表面与蛋白 G(PrG)的非共价相互作用是必要的。已经证实,包括碳纳米结构(CNS)在内的表面可以使蛋白质定向,从而更好地激活。本文采用实验和 MD 模拟技术研究了 PrG 与单壁碳纳米管(SWCNT)和石墨烯(Gra)纳米结构的相互作用。结果证实,PrG 可以与 SWCNT 和 Gra 充分相互作用,因此它们在介质中实现了良好的分散。结果表明,尽管与 Gra 相比,SWCNT 负载了更多的 PrG 含量,但 PrG 在 Gra 上的吸附并没有引起 IgG 倾向的显著变化。在 SWCNT 或 Gra 的存在下,PrG 采用了几种取向;然而,SWCNT 可以阻止 PrG-FcR。此外,还证实 SWCNT 降低了 PrG 中的α-螺旋结构含量。PrG 的α-螺旋结构减少和 PrG-SWCNT 的不当取向会显著降低 PrG 与 IgG 的 Fc 结合的倾向。重要的是,Gra 可以通过暴露 PrG-FcR 并阻止与 IgG 中的 Fab 有相互作用倾向的 PrG 片段来适当定向 PrG。

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