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2017 年中国武汉一起由 GII.17 诺如病毒污染的二次供水系统引起的胃肠炎暴发。

An Outbreak of Gastroenteritis Associated with GII.17 Norovirus-Contaminated Secondary Water Supply System in Wuhan, China, 2017.

机构信息

Division of Microbiology, Wuhan Centers for Disease Prevention and Control, No. 24 Jianghan North Road, Wuhan, 430015, Hubei, People's Republic of China.

Division of Infectious Diseases Control, Wuhan Centers for Disease Prevention and Control, No. 24 Jianghan North Road, Wuhan, 430015, Hubei, People's Republic of China.

出版信息

Food Environ Virol. 2019 Jun;11(2):126-137. doi: 10.1007/s12560-019-09371-7. Epub 2019 Feb 9.

DOI:10.1007/s12560-019-09371-7
PMID:30739247
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6513810/
Abstract

A gastroenteritis outbreak occurred in a university in May, 2017, Wuhan, China. The epidemiological survey and pathogen analysis were conducted to identify the pathogen and control this outbreak. Feces or anal swabs from individuals, water, and swabs taken from tap surfaces of the secondary water supply system (SWSS) and foods were collected for the detection of viruses and pathogenic enteric bacteria by real-time RT-PCR and culture, respectively. Nucleotide sequences were determined by RT-PCR and direct sequencing. Genotyping, phylogenetic, and recombination analyses were conducted by a web-based genotyping tool, MEGA, and RDP4 programs, respectively. Of 144 individuals enrolled, 75 met the case definitions. The epidemic curve showed one peak of incidence suggesting the most probable spread of a single common source. In total, 33 specimens were collected before disinfection of the SWSS. Of these, norovirus was detected and identified as GII.P17-GII.17 with 100% nucleotide sequence identity among the strains detected in ten students (10/14), a maintenance worker (1/2) dealing with the SWSS, four water samples (4/8), and two swabs taken from tap surfaces (2/3). Pathogens including Vibrio cholerae, Salmonella, Shigella, Vibrio parahaemolyticus, Bacillus cereus, enteropathogenic Escherichia coli, rotavirus, astrovirus, and sapovirus were negative. The GII.17 strains in this outbreak clustered closely in the same branch of the phylogenetic tree, and slightly apart from the strains of other cities in China, neighboring countries and regions, European and American countries. This gastroenteritis outbreak was deduced to be attributed to GII.P17-GII.17 norovirus contamination of the SWSS.

摘要

2017 年 5 月,中国武汉某大学发生一起肠胃炎暴发疫情。通过开展流行病学调查和病原体分析,明确了病原体并进行了疫情控制。采集病例粪便或肛拭子、水以及二次供水系统(SWSS)末梢水和食品涂抹拭子,分别采用实时 RT-PCR 和培养方法检测病毒和致病性肠道细菌。通过 RT-PCR 直接测序确定核苷酸序列。应用基于网络的基因分型工具 MEGA 和 RDP4 程序分别进行基因分型、系统进化和重组分析。共纳入 144 名研究对象,75 名符合病例定义。流行曲线显示一个发病高峰,提示最有可能由单一共同来源传播。SWSS 消毒前共采集了 33 份标本。其中,10 名学生(10/14)、1 名处理 SWSS 的维修工人(1/2)、4 份水样(4/8)和 2 份末梢水涂抹拭子(2/3)中检测到并鉴定为 GII.P17-GII.17 诺如病毒,其核苷酸序列完全一致。霍乱弧菌、沙门氏菌、志贺氏菌、副溶血性弧菌、蜡样芽胞杆菌、肠致病性大肠埃希菌、轮状病毒、星状病毒和杯状病毒均为阴性。本起疫情中的 GII.17 株在进化树上聚类密切,与中国其他城市、周边国家和地区、欧美国家的菌株略有分离。推断此次肠胃炎暴发是由 SWSS 中 GII.P17-GII.17 诺如病毒污染引起的。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0684/6513810/325a8727fc90/12560_2019_9371_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0684/6513810/d7994155971a/12560_2019_9371_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0684/6513810/a3215205389e/12560_2019_9371_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0684/6513810/325a8727fc90/12560_2019_9371_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0684/6513810/d7994155971a/12560_2019_9371_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0684/6513810/a3215205389e/12560_2019_9371_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0684/6513810/325a8727fc90/12560_2019_9371_Fig3_HTML.jpg

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