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一种改进的方法,用于测量小生物流体或组织样本中的绝对代谢物浓度。

An Improved Method for Measuring Absolute Metabolite Concentrations in Small Biofluid or Tissue Samples.

机构信息

Physiology and Metabolism Laboratory , The Francis Crick Institute , 1 Midland Road , London NW1 1AT , U.K.

Metabolomics Science Technology Platform , The Francis Crick Institute , 1 Midland Road , London NW1 1AT , U.K.

出版信息

J Proteome Res. 2019 Apr 5;18(4):1503-1512. doi: 10.1021/acs.jproteome.8b00773. Epub 2019 Feb 22.

Abstract

The measurement of absolute metabolite concentrations in small samples remains a significant analytical challenge. This is particularly the case when the sample volume is only a few microliters or less and cannot be determined accurately via direct measurement. We previously developed volume determination with two standards (VDTS) as a method to address this challenge for biofluids. As a proof-of-principle, we applied VDTS to NMR spectra of polar metabolites in the hemolymph (blood) of the tiny yet powerful genetic model Drosophila melanogaster. This showed that VDTS calculation of absolute metabolite concentrations in fed versus starved Drosophila larvae is more accurate than methods utilizing normalization to total spectral signal. Here, we introduce paired VDTS (pVDTS), an improved VDTS method for biofluids and solid tissues that implements the statistical power of paired control and experimental replicates. pVDTS utilizes new equations that also include a correction for dilution errors introduced by the variable surface wetness of solid samples. We then show that metabolite concentrations in Drosophila larvae are more precisely determined and logically consistent using pVDTS than using the original VDTS method. The refined pVDTS workflow described in this study is applicable to a wide range of different tissues and biofluids.

摘要

在小样本中测量绝对代谢物浓度仍然是一个重大的分析挑战。当样品体积只有几微升或更少且无法通过直接测量准确确定时,尤其如此。我们之前开发了使用两个标准的体积确定法 (VDTS),作为解决生物流体这一挑战的一种方法。作为原理验证,我们将 VDTS 应用于微小但功能强大的遗传模型黑腹果蝇血淋巴(血液)中极性代谢物的 NMR 光谱。这表明,与利用总光谱信号归一化的方法相比,VDTS 计算喂食与饥饿的果蝇幼虫中绝对代谢物浓度更准确。在这里,我们引入了配对 VDTS(pVDTS),这是一种用于生物流体和固体组织的改进的 VDTS 方法,它实现了配对对照和实验重复的统计能力。pVDTS 使用新的方程,还包括对固体样品表面湿润度变化引起的稀释误差的修正。然后,我们表明,使用 pVDTS 比使用原始 VDTS 方法更能精确确定果蝇幼虫中的代谢物浓度,并且结果更合乎逻辑。本研究中描述的经过改进的 pVDTS 工作流程适用于广泛的不同组织和生物流体。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/848c/6456871/60c44ee6d917/pr-2018-00773s_0001.jpg

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