Le Moine Bauer Sven, Sjøberg Andreas Gilje, L'Haridon Stéphane, Stokke Runar, Roalkvam Irene, Steen Ida Helene, Dahle Håkon
Department of Biological Sciences and K.G. Jebsen Center for Deep Sea Research, University of Bergen, N-5020 Bergen, Norway.
Université de Brest (UBO), Institut Universitaire Européen de la Mer (IUEM) - UMR 6197, Laboratoire de Microbiologie des Environnements Extrêmes (LM2E), Plouzané, France.
Int J Syst Evol Microbiol. 2019 Apr;69(4):975-981. doi: 10.1099/ijsem.0.003234. Epub 2019 Feb 13.
A bacterial strain, designated BAR1, was isolated from a microbial mat growing on the surface of a barite chimney at the Loki's Castle Vent Field, at a depth of 2216 m. Cells of strain BAR1 were rod-shaped, Gram-reaction-negative and grew on marine broth 2216 at 10-37 °C (optimum 27-35 °C), pH 5.5-8.0 (optimum pH 6.5-7.5) and 0.5-5.0 % NaCl (optimum 2 %). The DNA G+C content was 57.38 mol%. The membrane-associated major ubiquinone was Q-10, the fatty acid profile was dominated by C18 : 1ω7c (91 %), and the polar lipids detected were phosphatidylcholine, phosphatidylglycerol, phosphatidylethanolamine, one unidentified aminolipid, one unidentified lipid and one unidentified phospholipid. Phylogenetic analyses based on 16S rRNA gene sequences showed that strain BAR1 clustered together with Rhodobacterales bacterium PRT1, as well as the genera Halocynthiibacter and Pseudohalocynthiibacter in a polyphyletic clade within the Roseobacter clade. Several characteristics differentiate strain BAR1 from the aforementioned genera, including its motility, its piezophilic behaviour and its ability to grow at 35 °C and under anaerobic conditions. Accordingly, strain BAR1 is considered to represent a novel genus and species within the Roseobacter clade, for which the name Profundibacter amoris gen. nov., sp. nov. is proposed. The type strain is Profundibacter amoris BAR1 (=JCM 31874=DSM 104147).
从位于2216米深处的洛基城堡喷口场重晶石烟囱表面生长的微生物垫中分离出一株名为BAR1的细菌菌株。BAR1菌株的细胞呈杆状,革兰氏阴性,在2216号海水中于10 - 37°C(最适温度27 - 35°C)、pH 5.5 - 8.0(最适pH 6.5 - 7.5)和0.5 - 5.0% NaCl(最适2%)条件下生长。DNA G + C含量为57.38摩尔%。与膜相关的主要泛醌是Q - 10,脂肪酸谱以C18 : 1ω7c(91%)为主,检测到的极性脂质有磷脂酰胆碱、磷脂酰甘油、磷脂酰乙醇胺、一种未鉴定的氨基脂质、一种未鉴定的脂质和一种未鉴定的磷脂。基于16S rRNA基因序列的系统发育分析表明,BAR1菌株与红杆菌目细菌PRT1以及玫瑰杆菌纲内一个多系分支中的嗜盐菌属和假嗜盐菌属聚集在一起。BAR1菌株与上述属在几个特征上有所不同,包括其运动性、嗜压行为以及在35°C和厌氧条件下生长的能力。因此,BAR1菌株被认为代表玫瑰杆菌纲内的一个新属和新种,为此提出新属名为Profundibacter amoris gen. nov.,新种名为Profundibacter amoris sp. nov.。模式菌株是Profundibacter amoris BAR1(=JCM 31874=DSM 104147)。