Department of Radiation Oncology, Tohoku University Graduate School of Medicine, Sendai, Japan.
Department of Radiation Oncology, Tohoku University Graduate School of Medicine, Sendai, Japan.
Phys Med. 2019 Feb;58:141-148. doi: 10.1016/j.ejmp.2019.02.009. Epub 2019 Feb 19.
Robust feature selection in radiomic analysis is often implemented using the RIDER test-retest datasets. However, the CT Protocol between the facility and test-retest datasets are different. Therefore, we investigated possibility to select robust features using thoracic four-dimensional CT (4D-CT) scans that are available from patients receiving radiation therapy. In 4D-CT datasets of 14 lung cancer patients who underwent stereotactic body radiotherapy (SBRT) and 14 test-retest datasets of non-small cell lung cancer (NSCLC), 1170 radiomic features (shape: n = 16, statistics: n = 32, texture: n = 1122) were extracted. A concordance correlation coefficient (CCC) > 0.85 was used to select robust features. We compared the robust features in various 4D-CT group with those in test-retest. The total number of robust features was a range between 846/1170 (72%) and 970/1170 (83%) in all 4D-CT groups with three breathing phases (40%-60%); however, that was a range between 44/1170 (4%) and 476/1170 (41%) in all 4D-CT groups with 10 breathing phases. In test-retest, the total number of robust features was 967/1170 (83%); thus, the number of robust features in 4D-CT was almost equal to that in test-retest by using 40-60% breathing phases. In 4D-CT, respiratory motion is a factor that greatly affects the robustness of features, thus by using only 40-60% breathing phases, excessive dimension reduction will be able to be prevented in any 4D-CT datasets, and select robust features suitable for CT protocol of your own facility.
在放射组学分析中,稳健的特征选择通常使用 RIDER 测试-重测数据集来实现。然而,设施和测试-重测数据集之间的 CT 协议是不同的。因此,我们研究了使用来自接受放射治疗的患者的胸部四维 CT(4D-CT)扫描选择稳健特征的可能性。在接受立体定向体放射治疗(SBRT)的 14 例肺癌患者的 4D-CT 数据集和 14 例非小细胞肺癌(NSCLC)的测试-重测数据集,提取了 1170 个放射组学特征(形状:n=16,统计:n=32,纹理:n=1122)。使用一致性相关系数(CCC)>0.85 选择稳健特征。我们比较了各种 4D-CT 组与测试-重测组中的稳健特征。在所有具有三个呼吸阶段(40%-60%)的 4D-CT 组中,稳健特征的总数在 846/1170(72%)到 970/1170(83%)之间;然而,在所有具有 10 个呼吸阶段的 4D-CT 组中,稳健特征的总数在 44/1170(4%)到 476/1170(41%)之间。在测试-重测中,稳健特征的总数为 967/1170(83%);因此,通过使用 40-60%的呼吸阶段,4D-CT 中的稳健特征数量几乎与测试-重测中的特征数量相等。在 4D-CT 中,呼吸运动是极大影响特征稳健性的因素,因此通过仅使用 40-60%的呼吸阶段,可以防止在任何 4D-CT 数据集中过度降维,并选择适合您自己设施 CT 协议的稳健特征。