Institute of Marine & Environmental Technology, University of Maryland Baltimore County, 701 E. Pratt Street, Baltimore, MD, 21202, USA.
GeneDX 207 Perry Parkway, Gaithersburg, MD, 20877, USA.
Virol J. 2019 Mar 7;16(1):31. doi: 10.1186/s12985-019-1139-3.
Viral hemorrhagic septicemia virus (VHSV), a fish rhabdovirus belonging to the Novirhabdovirus genus, causes severe disease and mortality in many marine and freshwater fish species worldwide. VHSV isolates are classified into four genotypes and each group is endemic to specific geographic regions in the north Atlantic and Pacific Oceans. Most viruses in the European VHSV genotype Ia are highly virulent for rainbow trout (Oncorhynchus mykiss), whereas, VHSV genotype IVb viruses from the Great Lakes region in the United States, which caused high mortality in wild freshwater fish species, are avirulent for trout. This study describes molecular characterization and construction of an infectious clone of the virulent VHSV-Ia strain DK-3592B from Denmark, and application of the clone in reverse genetics to investigate the role of selected VHSV protein(s) in host-specific virulence in rainbow trout (referred to as trout-virulence).
Overlapping cDNA fragments of the DK-3592B genome were cloned after RT-PCR amplification, and their DNA sequenced by the di-deoxy chain termination method. A full-length cDNA copy (pVHSVdk) of the DK-3592B strain genome was constructed by assembling six overlapping cDNA fragments by using natural or artificially created unique restriction sites in the overlapping regions of the clones. Using an existing clone of the trout-avirulent VHSV-IVb strain MI03 (pVHSVmi), eight chimeric VHSV clones were constructed in which the coding region(s) of the glycoprotein (G), non-virion protein (NV), G and NV, or G, NV and L (polymerase) genes together, were exchanged between the two clones. Ten recombinant VHSVs (rVHSVs) were generated, including two parental rVHSVs, by transfecting fish cells with ten individual full-length plasmid constructs along with supporting plasmids using the established protocol. Recovered rVHSVs were characterized for viability and growth in vitro and used to challenge groups of juvenile rainbow trout by intraperitoneal injection.
Complete sequence of the VHSV DK-3592B genome was determined from the cloned cDNA and deposited in GenBank under the accession no. KC778774. The trout-virulent DK-3592B genome (genotype Ia) is 11,159 nt in length and differs from the trout-avirulent MI03 genome (pVHSVmi) by 13% at the nucleotide level. When the rVHSVs were assessed for the trout-virulence phenotype in vivo, the parental rVHSVdk and rVHSVmi were virulent and avirulent, respectively, as expected. Four chimeric rVHSVdk viruses with the substitutions of the G, NV, G and NV, or G, NV and L genes from the avirulent pVHSVmi constructs were still highly virulent (100% mortality), while the reciprocal four chimeric rVHSVmi viruses with genes from pVHSVdk remained avirulent (0-10% mortality).
When chimeric rVHSVs, containing all the G, NV, and L gene substitutions, were tested in vivo, they did not exhibit any change in trout-virulence relative to the background clones. These results demonstrate that the G, NV and L genes of VHSV are not, by themselves or in combination, major determinants of host-specific virulence in trout.
病毒性出血性败血症病毒(VHSV)是一种鱼类弹状病毒,属于 Novirhabdovirus 属,可导致全球许多海洋和淡水鱼类严重发病和死亡。VHSV 分离株分为四个基因型,每个组在北大西洋和太平洋的特定地理区域流行。欧洲 VHSV 基因型 Ia 的大多数病毒对虹鳟(Oncorhynchus mykiss)高度致病,而来自美国大湖地区的、对野生淡水鱼类具有高致死性的 VHSV 基因型 IVb 病毒对鳟鱼则无致病性。本研究描述了来自丹麦的强毒 VHSV-Ia 株 DK-3592B 的分子特征和感染性克隆的构建,并应用该克隆在反向遗传学中研究了所选 VHSV 蛋白在虹鳟鱼宿主特异性毒力中的作用(称为鳟鱼毒力)。
通过 RT-PCR 扩增后克隆 DK-3592B 基因组的重叠 cDNA 片段,并通过双脱氧链终止法对其 DNA 进行测序。通过使用克隆中重叠区域的天然或人工创建的独特限制位点,将六个重叠 cDNA 片段组装在一起,构建了 DK-3592B 株全基因组的全长 cDNA 拷贝(pVHSVdk)。利用现有的非致鳟鱼 VHSV-IVb 株 MI03(pVHSVmi)的克隆,在两个克隆之间交换糖蛋白(G)、非病毒蛋白(NV)、G 和 NV 或 G、NV 和 L(聚合酶)基因的编码区,构建了 8 个嵌合 VHSV 克隆。通过用十个全长质粒构建体和支持质粒转染鱼细胞,根据已建立的方案,生成了 10 种重组 VHSV(rVHSVs),包括两个亲本 rVHSVs。恢复的 rVHSVs在体外进行了活力和生长特性的表征,并通过腹腔注射对幼龄虹鳟鱼进行了挑战。
从克隆的 cDNA 中确定了 VHSV DK-3592B 基因组的完整序列,并在 GenBank 中以登录号 KC778774 提交。强毒 DK-3592B 基因组(基因型 Ia)全长 11,159nt,与弱毒 MI03 基因组(pVHSVmi)在核苷酸水平上的差异为 13%。当 rVHSVs 在体内评估鳟鱼毒力表型时,预期亲本 rVHSVdk 和 rVHSVmi 分别具有毒力和非致病性。含有来自弱毒 pVHSVmi 构建体的 G、NV、G 和 NV 或 G、NV 和 L 基因取代的四个嵌合 rVHSVdk 病毒仍然高度致病(100%死亡率),而含有来自 pVHSVdk 的基因的四个嵌合 rVHSVmi 病毒仍然非致病性(0-10%死亡率)。
当体内测试含有所有 G、NV 和 L 基因取代的嵌合 rVHSVs 时,与背景克隆相比,它们在鳟鱼毒力方面没有表现出任何变化。这些结果表明,VHSV 的 G、NV 和 L 基因本身或组合都不是决定鳟鱼宿主特异性毒力的主要因素。