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通过尺寸排阻色谱法分离血清外泌体以发现和验证子痫前期相关生物标志物

Serum Exosome Isolation by Size-Exclusion Chromatography for the Discovery and Validation of Preeclampsia-Associated Biomarkers.

作者信息

Navajas Rosana, Corrales Fernando J, Paradela Alberto

机构信息

Functional Proteomics Facility, Centro Nacional de Biotecnología (CNB-CSIC), ProteoRed-ISCIII, Madrid, Spain.

出版信息

Methods Mol Biol. 2019;1959:39-50. doi: 10.1007/978-1-4939-9164-8_3.

Abstract

Exosomes are extracellular nanovesicles of complex and heterogeneous composition that are released in biofluids such as blood. The interest in the characterization of exosomal biochemistry has increased over the last few years as they convey cellular proteins, lipids, and RNA that might reflect the biological or pathological condition of the source cell. In particular, association of changes of exosome proteins with specific pathogenic processes arises as a promising method to identify disease biomarkers as for the pregnancy-related preeclampsia. However, the overlapping physicochemical and structural characteristics of different types of extracellular vesicles have hindered the consolidation of universally accepted and standardized purification or enrichment protocols. Thus, it has been recently demonstrated that the exosomal protein profile resulting from in-depth proteomics analyses is highly dependent on the preparation protocol used, which will determine the particle type specificity and the presence/absence of contaminating proteins.In this chapter, an isolation method of serum exosomes based on size-exclusion chromatography (SEC) using qEV columns (Izon) is described. We show that this method is fast and reliable, as the population of exosomes isolated is homogeneous in terms of size, morphology, and protein composition. This exosome enrichment method is compatible with downstream qualitative and quantitative proteomic analysis of the samples.

摘要

外泌体是一种细胞外纳米囊泡,其组成复杂且异质,释放于血液等生物流体中。在过去几年里,人们对外泌体生物化学特征的研究兴趣与日俱增,因为它们携带的细胞蛋白质、脂质和RNA可能反映源细胞的生物学或病理状态。特别是,外泌体蛋白质变化与特定致病过程的关联,作为一种识别疾病生物标志物的有前景的方法,如用于妊娠相关的子痫前期。然而,不同类型细胞外囊泡重叠的物理化学和结构特征阻碍了普遍接受和标准化的纯化或富集方案的巩固。因此,最近有研究表明,深入蛋白质组学分析得到的外泌体蛋白质谱高度依赖于所使用的制备方案,这将决定颗粒类型特异性以及污染蛋白的存在与否。在本章中,将描述一种基于尺寸排阻色谱(SEC)使用qEV柱(Izon)分离血清外泌体的方法。我们表明,该方法快速且可靠,因为分离得到的外泌体群体在大小、形态和蛋白质组成方面是均匀的。这种外泌体富集方法与样品的下游定性和定量蛋白质组学分析兼容。

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