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量化日本的异质接触模式:一项社会接触调查。

Quantifying heterogeneous contact patterns in Japan: a social contact survey.

作者信息

Munasinghe Lankeshwara, Asai Yusuke, Nishiura Hiroshi

机构信息

Graduate School of Medicine, Hokkaido University, Kita 15 Jo Nishi 7 Chome, Sapporo, Japan.

出版信息

Theor Biol Med Model. 2019 Mar 20;16(1):6. doi: 10.1186/s12976-019-0102-8.

Abstract

BACKGROUND

Social contact surveys can greatly help in quantifying the heterogeneous patterns of infectious disease transmission. The present study aimed to conduct a contact survey in Japan, offering estimates of contact by age and location and validating a social contact matrix using a seroepidemiological dataset of influenza.

METHODS

An internet-based questionnaire survey was conducted, covering all 47 prefectures in Japan and including a total of 1476 households. The social contact matrix was quantified assuming reciprocity and using the maximum likelihood method. By imposing several parametric assumptions for the next-generation matrix, the empirical seroepidemiological data of influenza A (H1N1) 2009 was analysed and we estimated the basic reproduction number, R.

RESULTS

In total, the reported number of contacts on weekdays was 10,682 whereas that on weekend days was 8867. Strong age-dependent assortativity was identified. Forty percent of weekday contacts took place at schools or workplaces, but that declined to 14% on weekends. Accounting for the age-dependent heterogeneity with the known social contact matrix, the minimum value of the Akaike information criterion was obtained and R was estimated at 1.45 (95% confidence interval: 1.42, 1.49).

CONCLUSIONS

Survey datasets will be useful for parameterizing the heterogeneous transmission model of various directly transmitted infectious diseases in Japan. Age-dependent assortativity, especially among children, along with numerous contacts in school settings on weekdays implies the potential effectiveness of school closure.

摘要

背景

社交接触调查有助于量化传染病传播的异质性模式。本研究旨在在日本开展一项接触调查,提供按年龄和地点划分的接触估计,并使用流感血清流行病学数据集验证社交接触矩阵。

方法

开展了一项基于互联网的问卷调查,覆盖日本所有47个都道府县,共包括1476户家庭。假设存在互惠性并使用最大似然法对社交接触矩阵进行量化。通过对下一代矩阵施加若干参数假设,分析了2009年甲型H1N1流感的经验血清流行病学数据,并估计了基本再生数R。

结果

工作日报告的接触总数为10682次,而周末为8867次。确定了强烈的年龄依赖性分类。40%的工作日接触发生在学校或工作场所,但在周末降至14%。考虑到已知社交接触矩阵中年龄依赖性异质性,获得了赤池信息准则的最小值,估计R为1.45(95%置信区间:1.42,1.49)。

结论

调查数据集将有助于为日本各种直接传播传染病的异质性传播模型设定参数。年龄依赖性分类,尤其是在儿童中,以及工作日在学校环境中的大量接触意味着关闭学校可能有效。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/307b/6425701/cc797e682707/12976_2019_102_Fig1_HTML.jpg

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