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转录组和代谢组学分析表明细胞壁特性与 的耐旱性有关。

Transcriptional and Metabolomic Analyses Indicate that Cell Wall Properties are Associated with Drought Tolerance in .

机构信息

DLF Seeds A/S, Højerupvej 31, 4660 Store Heddinge, Denmark.

Institute of Biological, Environmental & Rural Sciences (IBERS), Aberystwyth University, Aberystwyth SY23 3EE, UK.

出版信息

Int J Mol Sci. 2019 Apr 10;20(7):1758. doi: 10.3390/ijms20071758.

DOI:10.3390/ijms20071758
PMID:30974727
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6479473/
Abstract

is an established model for drought tolerance. We previously identified accessions exhibiting high tolerance, susceptibility and intermediate tolerance to drought; respectively, ABR8, KOZ1 and ABR4. Transcriptomics and metabolomic approaches were used to define tolerance mechanisms. Transcriptional analyses suggested relatively few drought responsive genes in ABR8 compared to KOZ1. Linking these to gene ontology (GO) terms indicated enrichment for "regulated stress response", "plant cell wall" and "oxidative stress" associated genes. Further, tolerance correlated with pre-existing differences in cell wall-associated gene expression including glycoside hydrolases, pectin methylesterases, expansins and a pectin acetylesterase. Metabolomic assessments of the same samples also indicated few significant changes in ABR8 with drought. Instead, pre-existing differences in the cell wall-associated metabolites correlated with drought tolerance. Although other features, e.g., jasmonate signaling were suggested in our study, cell wall-focused events appeared to be predominant. Our data suggests two different modes through which the cell wall could confer drought tolerance: (i) An active response mode linked to stress induced changes in cell wall features, and (ii) an intrinsic mode where innate differences in cell wall composition and architecture are important. Both modes seem to contribute to ABR8 drought tolerance. Identification of the exact mechanisms through which the cell wall confers drought tolerance will be important in order to inform development of drought tolerant crops.

摘要

是耐旱性的成熟模型。我们之前鉴定出对干旱表现出高耐受性、敏感性和中间耐受性的品系;分别是 ABR8、KOZ1 和 ABR4。使用转录组学和代谢组学方法来定义耐受机制。转录分析表明,与 KOZ1 相比,ABR8 中相对较少的干旱响应基因。将这些基因与基因本体(GO)术语联系起来表明,与“调节应激反应”、“植物细胞壁”和“氧化应激”相关的基因富集。此外,与细胞壁相关基因表达的预先存在的差异相关的耐受性与糖苷水解酶、果胶甲酯酶、扩张蛋白和果胶乙酰酯酶相关。对相同样本的代谢组学评估也表明,干旱时 ABR8 中几乎没有显著变化。相反,细胞壁相关代谢物的预先存在的差异与耐旱性相关。尽管我们的研究表明存在其他特征,例如茉莉酸信号转导,但细胞壁相关事件似乎占主导地位。我们的数据表明,细胞壁赋予耐旱性有两种不同的模式:(i)与细胞壁特征的胁迫诱导变化相关的主动响应模式,和(ii)细胞壁组成和结构固有差异很重要的固有模式。这两种模式似乎都有助于 ABR8 的耐旱性。确定细胞壁赋予耐旱性的确切机制对于告知耐旱作物的开发将是重要的。

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