Department of Ecology and Evolution, The University of Chicago, 1101 E 57th St, Chicago, IL, 60637, USA.
Center for the Physics of Living Systems, Department of Physics, MIT, 400 Technology Square, Cambridge, MA, 02139, USA.
Nat Commun. 2019 Apr 16;10(1):1767. doi: 10.1038/s41467-019-09764-z.
Despite considerable efforts to characterize the microbial ecology of the built environment, the metabolic mechanisms underpinning microbial colonization and successional dynamics remain unclear, particularly at high moisture conditions. Here, we applied bacterial/viral particle counting, qPCR, amplicon sequencing of the genes encoding 16S and ITS rRNA, and metabolomics to longitudinally characterize the ecological dynamics of four common building materials maintained at high humidity. We varied the natural inoculum provided to each material and wet half of the samples to simulate a potable water leak. Wetted materials had higher growth rates and lower alpha diversity compared to non-wetted materials, and wetting described the majority of the variance in bacterial, fungal, and metabolite structure. Inoculation location was weakly associated with bacterial and fungal beta diversity. Material type influenced bacterial and viral particle abundance and bacterial and metabolic (but not fungal) diversity. Metabolites indicative of microbial activity were identified, and they too differed by material.
尽管人们已经做出了相当大的努力来描述建筑环境的微生物生态学,但微生物定殖和演替动态的代谢机制仍不清楚,特别是在高湿度条件下。在这里,我们应用细菌/病毒颗粒计数、qPCR、16S 和 ITS rRNA 编码基因的扩增子测序以及代谢组学,对在高湿度下保持的四种常见建筑材料的生态动态进行了纵向描述。我们改变了每种材料的自然接种物,并将样本的一半弄湿,以模拟饮用水泄漏。与非湿材料相比,湿材料具有更高的生长速度和更低的 alpha 多样性,并且润湿描述了细菌、真菌和代谢物结构的大部分方差。接种位置与细菌和真菌的 beta 多样性弱相关。材料类型影响细菌和病毒颗粒的丰度以及细菌和代谢(但不是真菌)多样性。鉴定出了指示微生物活性的代谢产物,它们也因材料而异。