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miR-192/215-5p 通过靶向共同的代谢途径充当肿瘤抑制因子,并将克罗恩病和结直肠癌联系起来:一项综合信息学分析和实验研究。

miR-192/215-5p act as tumor suppressors and link Crohn's disease and colorectal cancer by targeting common metabolic pathways: An integrated informatics analysis and experimental study.

机构信息

Department of Urology, Fujian Provincial Key Laboratory of Transplant Biology, 900 Hospital of the Joint Logistics Team, Xiamen University, Fuzhou, Fujian, China.

Department of Neuro-oncology, University of Texas, MD Anderson Cancer Center, Houston, Texas.

出版信息

J Cell Physiol. 2019 Nov;234(11):21060-21075. doi: 10.1002/jcp.28709. Epub 2019 Apr 24.

Abstract

MicroRNAs have emerged as key regulators involved in a variety of biological processes. Previous studies have demonstrated that miR-192/215 participated in progression of Crohn's disease and colorectal cancer. However, their concrete relationships and regulation networks in diseases remain unclear. Here, we used bioinformatics methods to expound miR-192/215-5p macrocontrol regulatory networks shared by two diseases. For data mining and figure generation, several miRNA prediction tools, Human miRNA tissue atlas, FunRich, miRcancer, MalaCards, STRING, GEPIA, cBioPortal, GEO databases, Pathvisio, Graphpad Prism 6 software, etc . are extensively applied. miR-192/215-5p were specially distributed in colon tissues and enriched biological pathways were closely associated with human cancers. Emerging role of miR-192/215-5p and their common pathways in Crohn's disease and colorectal cancer was also analyzed. Based on results derived from multiple approaches, we identified the biological functions of miR-192/215-5p as a tumor suppressor and link Crohn's disease and colorectal cancer by targeting triglyceride synthesis and extracellular matrix remodeling pathways.

摘要

微小 RNA 已成为参与多种生物过程的关键调节因子。先前的研究表明,miR-192/215 参与了克罗恩病和结直肠癌的进展。然而,它们在疾病中的具体关系和调节网络仍不清楚。在这里,我们使用生物信息学方法来阐述这两种疾病共享的 miR-192/215-5p 宏观调控网络。对于数据挖掘和图形生成,我们广泛应用了几种 miRNA 预测工具、Human miRNA tissue atlas、FunRich、miRcancer、MalaCards、STRING、GEPIA、cBioPortal、GEO 数据库、Pathvisio、Graphpad Prism 6 软件等。miR-192/215-5p 特别分布在结肠组织中,富集的生物途径与人类癌症密切相关。还分析了 miR-192/215-5p 在克罗恩病和结直肠癌中的新兴作用及其共同途径。基于多种方法的结果,我们确定了 miR-192/215-5p 的生物学功能,作为一种肿瘤抑制因子,通过靶向甘油三酯合成和细胞外基质重塑途径将克罗恩病和结直肠癌联系起来。

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