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人λ轻链基因座:三个基因组J区的组织与DNA序列

Human lambda light chain locus: organization and DNA sequences of three genomic J regions.

作者信息

Udey J A, Blomberg B

出版信息

Immunogenetics. 1987;25(1):63-70. doi: 10.1007/BF00768834.

Abstract

Evidence for the genomic organization of human lambda light chain joining (J) region gene segments is presented. A mouse J lambda probe was used in Southern hybridizations to localize joining region sequences in a cosmid clone containing the genomic cluster of six human lambda constant (C) region gene segments. The results of these hybridizations suggest the presence of at least one J gene segment upstream from each constant region gene segment. The DNA sequences indicate that the human J lambda 1, J lambda 2, and J lambda 3 gene segments have consensus nonamer and heptamer sequences, proposed to be involved in V-J joining, are capable of encoding the known amino acid sequences for the respective J peptides, and have a sequence which could give a functional RNA splice site at the end of their coding regions. Our data show that a single functional J is located 1.3 or 1.6 kb upstream of each of the C lambda gene segments known to encode the Mcg, Kern- Oz-, and Kern- Oz+ isotypes. Therefore, the gene organization of this region of the human lambda locus is J1C1-J2C2-J3C3. The DNA sequences of J lambda 1, J lambda 2, and J lambda 3 presented in this paper establish that a single J lambda gene segment precedes each expressed C lambda gene segment, and support a model for the evolution of the human lambda JC clusters where J1C1 and J2C2-J3C3 arose from different ancestral JC units.

摘要

本文提供了人类λ轻链连接(J)区基因片段基因组组织的证据。在Southern杂交中使用小鼠Jλ探针,以定位包含六个人类λ恒定(C)区基因片段基因组簇的黏粒克隆中的连接区序列。这些杂交结果表明,每个恒定区基因片段上游至少存在一个J基因片段。DNA序列表明,人类Jλ1、Jλ2和Jλ3基因片段具有共有九聚体和七聚体序列,这些序列被认为参与V-J连接,能够编码各自J肽的已知氨基酸序列,并且在其编码区末端具有可产生功能性RNA剪接位点的序列。我们的数据表明,单个功能性J位于已知编码Mcg、Kern-Oz-和Kern-Oz+同种型的每个Cλ基因片段上游1.3或1.6 kb处。因此,人类λ基因座该区域的基因组织为J1C1-J2C2-J3C3。本文中呈现的Jλ1、Jλ2和Jλ3的DNA序列证实,每个表达的Cλ基因片段之前都有一个单一的Jλ基因片段,并支持人类λ JC簇进化的模型,其中J1C1和J2C2-J3C3起源于不同的祖先JC单元。

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