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福氏志贺菌 1c 血清型 Y394 质粒为细菌在宿主中提供优势。

Plasmids of Shigella flexneri serotype 1c strain Y394 provide advantages to bacteria in the host.

机构信息

Division of Biomedical Science and Biochemistry, Research School of Biology, The Australian National University, Canberra, ACT, Australia.

出版信息

BMC Microbiol. 2019 Apr 29;19(1):86. doi: 10.1186/s12866-019-1455-1.

Abstract

BACKGROUND

Shigella flexneri has an extremely complex genome with a significant number of virulence traits acquired by mobile genetic elements including bacteriophages and plasmids. S. flexneri serotype 1c is an emerging etiological agent of bacillary dysentery in developing countries. In this study, the complete nucleotide sequence of two plasmids of S. flexneri serotype 1c strain Y394 was determined and analysed.

RESULTS

The plasmid pINV-Y394 is an invasive or virulence plasmid of size 221,293 bp composed of a large number of insertion sequences (IS), virulence genes, regulatory and maintenance genes. Three hundred and twenty-eight open reading frames (ORFs) were identified in pINV-Y394, of which about a half (159 ORFs) were identified as IS elements. Ninety-seven ORFs were related to characterized genes (majority of which are associated with virulence and their regulons), and 72 ORFs were uncharacterized or hypothetical genes. The second plasmid pNV-Y394 is of size 10,866 bp and encodes genes conferring resistance against multiple antibiotics of clinical importance. The multidrug resistance gene cassette consists of tetracycline resistance gene tetA, streptomycin resistance gene strA-strB and sulfonamide-resistant dihydropteroate synthase gene sul2.

CONCLUSIONS

These two plasmids together play a key role in the fitness of Y394 in the host environment. The findings from this study indicate that the pathogenic S. flexneri is a highly niche adaptive pathogen which is able to co-evolve with its host and respond to the selection pressure in its environment.

摘要

背景

福氏志贺菌具有极其复杂的基因组,大量毒力特性是通过移动遗传元件(包括噬菌体和质粒)获得的。志贺氏菌 1c 血清型是发展中国家细菌性痢疾的新兴病原体。本研究确定并分析了志贺氏菌 1c 血清型菌株 Y394 的两个质粒的完整核苷酸序列。

结果

质粒 pINV-Y394 是一个 221293bp 的侵袭性或毒力质粒,由大量插入序列(IS)、毒力基因、调控和维持基因组成。在 pINV-Y394 中鉴定出 328 个开放阅读框(ORF),其中约一半(159 个 ORF)被鉴定为 IS 元件。97 个 ORF 与已鉴定的基因有关(其中大多数与毒力及其调控子有关),72 个 ORF 未被鉴定或假设为基因。第二个质粒 pNV-Y394 大小为 10866bp,编码对多种临床重要抗生素具有抗性的基因。多药耐药基因盒由四环素耐药基因 tetA、链霉素耐药基因 strA-strB 和磺胺耐药二氢叶酸合成酶基因 sul2 组成。

结论

这两个质粒共同在 Y394 在宿主环境中的适应性中发挥关键作用。本研究结果表明,致病性福氏志贺菌是一种高度适应生态位的病原体,能够与宿主共同进化,并对其环境中的选择压力做出反应。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ff51/6489325/061fa6140427/12866_2019_1455_Fig1_HTML.jpg

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