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幼儿皮层下发育时空建模的模型选择

Model selection for spatiotemporal modeling of early childhood sub-cortical development.

作者信息

Fishbaugh James, Paniagua Beatriz, Mostapha Mahmoud, Styner Martin, Murphy Veronica, Gilmore John, Gerig Guido

机构信息

Computer Science and Engineering, Tandon School of Engineering, NYU.

Kitware Inc.

出版信息

Proc SPIE Int Soc Opt Eng. 2019 Feb;10949. doi: 10.1117/12.2513030. Epub 2019 Mar 15.

DOI:10.1117/12.2513030
PMID:31073259
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6503845/
Abstract

Spatiotemporal shape models capture the dynamics of shape change over time and are an essential tool for monitoring and measuring anatomical growth or degeneration. In this paper we evaluate non-parametric shape regression on the challenging problem of modeling early childhood sub-cortical development starting from birth. Due to the flexibility of the model, it can be challenging to choose parameters which lead to a good model fit yet does not over fit. We systematically test a variety of parameter settings to evaluate model fit as well as the sensitivity of the method to specific parameters, and we explore the impact of missing data on model estimation.

摘要

时空形状模型捕捉形状随时间变化的动态,是监测和测量解剖结构生长或退化的重要工具。在本文中,我们评估了非参数形状回归在从出生开始对幼儿皮质下发育进行建模这一具有挑战性的问题上的应用。由于模型的灵活性,选择既能导致良好的模型拟合又不会过度拟合的参数可能具有挑战性。我们系统地测试了各种参数设置,以评估模型拟合以及该方法对特定参数的敏感性,并且我们探讨了缺失数据对模型估计的影响。

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本文引用的文献

1
Geodesic shape regression with multiple geometries and sparse parameters.具有多种几何形状和稀疏参数的测地线形状回归。
Med Image Anal. 2017 Jul;39:1-17. doi: 10.1016/j.media.2017.03.008. Epub 2017 Apr 5.
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Sasaki Metrics for Analysis of Longitudinal Data on Manifolds.用于流形上纵向数据分析的佐佐木度量
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Morphometry of anatomical shape complexes with dense deformations and sparse parameters.具有密集变形和稀疏参数的解剖形状复合体的形态测量学
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Front Neuroinform. 2014 Feb 6;8:7. doi: 10.3389/fninf.2014.00007. eCollection 2014.
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Estimation of smooth growth trajectories with controlled acceleration from time series shape data.从时间序列形状数据中估计具有受控加速度的平滑生长轨迹。
Med Image Comput Comput Assist Interv. 2011;14(Pt 2):401-8. doi: 10.1007/978-3-642-23629-7_49.
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Particle based shape regression of open surfaces with applications to developmental neuroimaging.基于粒子的开放表面形状回归及其在发育神经成像中的应用。
Med Image Comput Comput Assist Interv. 2009;12(Pt 2):167-74. doi: 10.1007/978-3-642-04271-3_21.
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Spatiotemporal atlas estimation for developmental delay detection in longitudinal datasets.用于纵向数据集中发育迟缓检测的时空图谱估计
Med Image Comput Comput Assist Interv. 2009;12(Pt 1):297-304. doi: 10.1007/978-3-642-04268-3_37.
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