Integrated DNA Technologies, Inc., Coralville, Iowa.
Nucleic Acid Ther. 2019 Aug;29(4):167-174. doi: 10.1089/nat.2019.0790. Epub 2019 May 20.
Introduction of CRISPR/Cas9 methods (clustered regularly interspaced short palindromic repeats, CRISPR-associated protein 9) have led to a huge surge in the use of precision genome editing for research applications. Translational medical efforts are likewise rapidly progressing, and Phase I clinical trials using these techniques have already started. As with any new technology that is applied to medical therapeutics, risks must be carefully defined and steps taken to mitigate side effects wherever possible. Effective methods are now available that permit identification of off-target cleavage events, a major class of potential side effects seen in mammalian genome editing. Off-target prediction algorithms are improving and have utility, but are insufficient to use alone. Empiric methods to define the off-target profile must also be used. Once defined, the frequency of off-target cleavage can be minimized using methods that limit the duration of exposure of the genome to the active genome editing complex, for example, using the ribonucleoprotein (RNP) approach. In addition, Cas9 mutants have been developed that markedly reduce the rate of off-target cleavage compared to the wild-type enzyme. Use of these new tools should become standard practice for medical applications.
CRISPR/Cas9 方法(成簇规律间隔短回文重复序列,CRISPR 相关蛋白 9)的引入使得精准基因组编辑在研究应用中的使用迅速增加。转化医学的努力也在迅速推进,使用这些技术的 I 期临床试验已经开始。与任何应用于医学治疗的新技术一样,必须仔细定义风险,并尽可能采取措施减轻副作用。现在已经有了有效的方法,可以识别潜在副作用的靶点外切割事件,这是在哺乳动物基因组编辑中看到的主要一类潜在副作用。靶点外预测算法正在不断改进并具有实用性,但不足以单独使用。还必须使用经验方法来定义靶点外的特征。一旦确定,就可以使用限制基因组与活性基因组编辑复合物暴露时间的方法来最小化靶点外切割的频率,例如使用核糖核蛋白(RNP)方法。此外,已经开发出 Cas9 突变体,与野生型酶相比,其靶点外切割的速度明显降低。对于医学应用,应该将这些新工具的使用作为标准实践。