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解开谜团:利用常规电子健康记录和标准化生物样本库建立大数据分析研究数据平台,以改善心肌病患者的护理。

UNRAVEL: big data analytics research data platform to improve care of patients with cardiomyopathies using routine electronic health records and standardised biobanking.

作者信息

Sammani A, Jansen M, Linschoten M, Bagheri A, de Jonge N, Kirkels H, van Laake L W, Vink A, van Tintelen J P, Dooijes D, Te Riele A S J M, Harakalova M, Baas A F, Asselbergs F W

机构信息

Department of Cardiology, Division Heart & Lungs, University Medical Centre Utrecht, University of Utrecht, Utrecht, The Netherlands.

Department of Genetics, Division Laboratories, Pharmacy and Biomedical Genetics, University Medical Centre Utrecht, University of Utrecht, Utrecht, The Netherlands.

出版信息

Neth Heart J. 2019 Sep;27(9):426-434. doi: 10.1007/s12471-019-1288-4.

Abstract

INTRODUCTION

Despite major advances in our understanding of genetic cardiomyopathies, they remain the leading cause of premature sudden cardiac death and end-stage heart failure in persons under the age of 60 years. Integrated research databases based on a large number of patients may provide a scaffold for future research. Using routine electronic health records and standardised biobanking, big data analysis on a larger number of patients and investigations are possible. In this article, we describe the UNRAVEL research data platform embedded in routine practice to facilitate research in genetic cardiomyopathies.

DESIGN

Eligible participants with proven or suspected cardiac disease and their relatives are asked for permission to use their data and to draw blood for biobanking. Routinely collected clinical data are included in a research database by weekly extraction. A text-mining tool has been developed to enrich UNRAVEL with unstructured data in clinical notes.

PRELIMINARY RESULTS

Thus far, 828 individuals with a median age of 57 years have been included, 58% of whom are male. All data are captured in a temporal sequence amounting to a total of 18,565 electrocardiograms, 3619 echocardiograms, data from over 20,000 radiological examinations and 650,000 individual laboratory measurements.

CONCLUSION

Integration of routine electronic health care in a research data platform allows efficient data collection, including all investigations in chronological sequence. Trials embedded in the electronic health record are now possible, providing cost-effective ways to answer clinical questions. We explicitly welcome national and international collaboration and have provided our protocols and other materials on www.unravelrdp.nl .

摘要

引言

尽管我们对遗传性心肌病的认识取得了重大进展,但它们仍然是60岁以下人群过早发生心源性猝死和终末期心力衰竭的主要原因。基于大量患者的综合研究数据库可为未来研究提供框架。利用常规电子健康记录和标准化生物样本库,可以对更多患者进行大数据分析和调查。在本文中,我们描述了嵌入常规实践中的UNRAVEL研究数据平台,以促进遗传性心肌病的研究。

设计

对于确诊或疑似患有心脏病的合格参与者及其亲属,我们会请求他们允许使用其数据并采集血液用于生物样本库。通过每周提取,将常规收集的临床数据纳入研究数据库。我们开发了一种文本挖掘工具,以丰富UNRAVEL中临床记录的非结构化数据。

初步结果

到目前为止,已纳入828名个体,中位年龄为57岁,其中58%为男性。所有数据按时间顺序记录,总共包括18,565份心电图、3619份超声心动图、20,000多次放射学检查的数据以及650,000次个体实验室测量数据。

结论

将常规电子医疗保健整合到研究数据平台中可实现高效的数据收集,包括按时间顺序进行的所有检查。现在可以开展嵌入电子健康记录的试验,为回答临床问题提供具有成本效益的方法。我们明确欢迎国内和国际合作,并已在www.unravelrdp.nl上提供了我们的方案和其他材料。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9988/6712144/399a45ad076a/12471_2019_1288_Fig1_HTML.jpg

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