College of Life and Environmental Sciences, Minzu University of China, Beijing 100081, China.
Key Laboratory of Biogeography and Bioresource in Arid Land, Institute of Ecology and Geography in Xinjiang, The Chinese Academy of Sciences, Urumqi, Xinjiang, China.
Genes (Basel). 2019 Jun 21;10(6):472. doi: 10.3390/genes10060472.
Chitinase is a kind of hydrolase with chitin as a substrate and is proposed to play an essential role in plant defense system by functioning against fungal pathogens through degrading chitin. Recent studies indicated chitinase is also involved in abiotic stress response in plants, helping plants to survive in stressful environments. , a rare evergreen broad-leaved shrub distrusted in deserts in Central Asia, exhibits a high level of tolerance to drought and low temperature stresses. To identify the chitinase gene involved in drought and low temperature responses in , we performed genome-wide identification, classification, sequence alignment, and spatio-temporal gene expression analysis of the chitinases in under osmotic and low temperature stress. A total of 32 chitinase genes belonging to glycosyl hydrolase 18 (GH18) and GH19 families were identified from . Class III chitinases appear to be amplified quantitatively in , and their genes carry less introns, indicating their involvement in stress response in . The expression level of the majority of chitinases varied in leaves, stems, and roots, and regulated under environmental stress. Some chitinases, such as , , and , are strongly induced by low temperature and osmotic stress, and the MYC/ICE1 (inducer of CBF expression 1) binding sites in promoter regions may mediate the induction of these chitinases under stress. These chitinases might play key roles in the tolerance to these abiotic stress in and have potential for biotechnological applications. This study provided important data for understanding the biological functions of chitinases in .
几丁质酶是一种以几丁质为底物的水解酶,通过降解几丁质来对抗真菌病原体,被认为在植物防御系统中发挥着重要作用。最近的研究表明,几丁质酶也参与植物的非生物胁迫响应,帮助植物在胁迫环境中存活。天山扁柏是中亚荒漠中一种罕见的常绿阔叶灌木,对干旱和低温胁迫表现出较高的耐受性。为了鉴定与干旱和低温胁迫相关的几丁质酶基因,我们对天山扁柏在渗透和低温胁迫下的几丁质酶进行了全基因组鉴定、分类、序列比对和时空基因表达分析。从天山扁柏中共鉴定出 32 个几丁质酶基因,属于糖苷水解酶 18(GH18)和 GH19 家族。III 类几丁质酶在天山扁柏中似乎被定量扩增,它们的基因携带较少的内含子,表明它们参与了胁迫响应。大多数几丁质酶在叶片、茎和根中的表达水平不同,并受到环境胁迫的调节。一些几丁质酶,如 、 、和 ,强烈地被低温和渗透胁迫诱导,并且启动子区域中的 MYC/ICE1(CBF 表达诱导物 1)结合位点可能介导这些几丁质酶在胁迫下的诱导。这些几丁质酶可能在天山扁柏对这些非生物胁迫的耐受性中发挥关键作用,并且具有生物技术应用的潜力。本研究为了解几丁质酶在天山扁柏中的生物学功能提供了重要数据。