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一种海洋细菌酶级联反应可降解海藻多糖岩藻聚糖。

A marine bacterial enzymatic cascade degrades the algal polysaccharide ulvan.

机构信息

Department of Biotechnology & Enzyme Catalysis, Institute of Biochemistry, University Greifswald, Greifswald, Germany.

Sorbonne Université, CNRS, Integrative Biology of Marine Models, Station Biologique de Roscoff, Roscoff, France.

出版信息

Nat Chem Biol. 2019 Aug;15(8):803-812. doi: 10.1038/s41589-019-0311-9. Epub 2019 Jul 8.

Abstract

Marine seaweeds increasingly grow into extensive algal blooms, which are detrimental to coastal ecosystems, tourism and aquaculture. However, algal biomass is also emerging as a sustainable raw material for the bioeconomy. The potential exploitation of algae is hindered by our limited knowledge of the microbial pathways-and hence the distinct biochemical functions of the enzymes involved-that convert algal polysaccharides into oligo- and monosaccharides. Understanding these processes would be essential, however, for applications such as the fermentation of algal biomass into bioethanol or other value-added compounds. Here, we describe the metabolic pathway that enables the marine flavobacterium Formosa agariphila to degrade ulvan, the main cell wall polysaccharide of bloom-forming Ulva species. The pathway involves 12 biochemically characterized carbohydrate-active enzymes, including two polysaccharide lyases, three sulfatases and seven glycoside hydrolases that sequentially break down ulvan into fermentable monosaccharides. This way, the enzymes turn a previously unexploited renewable into a valuable and ecologically sustainable bioresource.

摘要

海洋藻类越来越多地大量繁殖,形成藻华,这对沿海生态系统、旅游业和水产养殖业造成了危害。然而,藻类生物量也正在成为生物经济的可持续原料。由于我们对将藻类多糖转化为低聚糖和单糖的微生物途径(以及相关酶的独特生化功能)了解有限,因此藻类的潜在开发受到了阻碍。然而,对于将藻类生物质发酵成生物乙醇或其他高附加值化合物等应用,了解这些过程至关重要。在这里,我们描述了使海洋黄杆菌 Formosa agariphila 能够降解形成藻华的 Ulva 属物种的主要细胞壁多糖——岩藻聚糖的代谢途径。该途径涉及 12 种经过生化表征的碳水化合物活性酶,包括两种多糖裂解酶、三种硫酸酯酶和七种糖苷水解酶,它们依次将岩藻聚糖分解成可发酵的单糖。通过这种方式,这些酶将以前未被开发的可再生资源转化为有价值且生态可持续的生物资源。

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