• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

受基因组学启发发现马赛菌素,一种来自sp. NR 4-1的农杆菌素差向异构体。

Genomics-inspired discovery of massiliachelin, an agrochelin epimer from sp. NR 4-1.

作者信息

Diettrich Jan, Kage Hirokazu, Nett Markus

机构信息

Department of Biochemical and Chemical Engineering, Laboratory of Technical Biology, TU Dortmund University, Emil-Figge-Strasse 66, 44227 Dortmund, Germany.

出版信息

Beilstein J Org Chem. 2019 Jun 13;15:1298-1303. doi: 10.3762/bjoc.15.128. eCollection 2019.

DOI:10.3762/bjoc.15.128
PMID:31293678
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6604713/
Abstract

A putative siderophore locus was detected in the genome of the violacein-producing bacterium sp. NR 4-1 and predicted to direct the biosynthesis of a molecule that is structurally related to the thiazoline-containing siderophore micacocidin. In order to track this compound, we analyzed the metabolic profiles of cultures grown under different iron concentrations. A compound which was found to be predominantly produced under iron deficiency was subsequently isolated. Its structural characterization by spectroscopic and bioinformatic analyses revealed a previously not known diastereomer of the cytotoxic alkaloid agrochelin. The structure of this natural product, which was named massiliachelin, corresponds to the assembly line encoded by the identified siderophore locus.

摘要

在产紫菌素的细菌sp. NR 4-1基因组中检测到一个假定的铁载体基因座,预计该基因座可指导一种与含噻唑啉铁载体米卡可西定结构相关的分子的生物合成。为了追踪这种化合物,我们分析了在不同铁浓度下培养的代谢谱。随后分离出一种在缺铁条件下主要产生的化合物。通过光谱和生物信息学分析对其结构进行表征,揭示了一种以前未知的细胞毒性生物碱农杆菌素的非对映异构体。这种天然产物被命名为马赛菌素,其结构与所鉴定的铁载体基因座编码的装配线相对应。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a6aa/6604713/ec9c5f14ceb6/Beilstein_J_Org_Chem-15-1298-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a6aa/6604713/d32ec619e7b0/Beilstein_J_Org_Chem-15-1298-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a6aa/6604713/ec9c5f14ceb6/Beilstein_J_Org_Chem-15-1298-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a6aa/6604713/d32ec619e7b0/Beilstein_J_Org_Chem-15-1298-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a6aa/6604713/ec9c5f14ceb6/Beilstein_J_Org_Chem-15-1298-g003.jpg

相似文献

1
Genomics-inspired discovery of massiliachelin, an agrochelin epimer from sp. NR 4-1.受基因组学启发发现马赛菌素,一种来自sp. NR 4-1的农杆菌素差向异构体。
Beilstein J Org Chem. 2019 Jun 13;15:1298-1303. doi: 10.3762/bjoc.15.128. eCollection 2019.
2
Intermediates and shunt products of massiliachelin biosynthesis in sp. NR 4-1.马赛菌素生物合成在sp. NR 4-1中的中间体和分流产物。
Beilstein J Org Chem. 2023 Jun 23;19:909-917. doi: 10.3762/bjoc.19.69. eCollection 2023.
3
Complete genome sequence of antibiotic and anticancer agent violacein producing Massilia sp. strain NR 4-1.产抗生素和抗癌剂紫菌素的马赛菌属菌株NR 4-1的全基因组序列
J Biotechnol. 2016 Apr 10;223:36-7. doi: 10.1016/j.jbiotec.2016.02.027. Epub 2016 Feb 23.
4
Siderophore-Mediated Iron Acquisition Enhances Resistance to Oxidative and Aromatic Compound Stress in JMP134.铁载体介导的铁获取增强了 JMP134 对氧化和芳香族化合物应激的抗性。
Appl Environ Microbiol. 2018 Dec 13;85(1). doi: 10.1128/AEM.01938-18. Print 2019 Jan 1.
5
Complete Genome Sequence of Massilia oculi sp. nov. CCUG 43427 (=DSM 26321), the Type Strain of M. oculi, and Comparison with Genome Sequences of Other Massilia Strains.新型眼致病菌马塞利亚菌 CCUG 43427(=DSM 26321) 全基因组序列,该菌为马塞利亚菌的模式菌株,与其他马塞利亚菌菌株的基因组序列比较。
Curr Microbiol. 2019 Sep;76(9):1082-1086. doi: 10.1007/s00284-018-1597-7. Epub 2018 Nov 15.
6
Massilia sp. BS-1, a novel violacein-producing bacterium isolated from soil.马赛菌属菌株BS-1,一种从土壤中分离出的新型产紫菌素细菌。
Biosci Biotechnol Biochem. 2011;75(10):2008-10. doi: 10.1271/bbb.100729. Epub 2011 Oct 7.
7
sp. nov., isolated from the soil of a cultivated maize field.sp. nov.,分离自一块栽培玉米地的土壤。
Int J Syst Evol Microbiol. 2020 Jun;70(6):3912-3920. doi: 10.1099/ijsem.0.004266. Epub 2020 Jun 8.
8
Massilia putida sp. nov., a dimethyl disulfide-producing bacterium isolated from wolfram mine tailing.恶臭马赛菌新种,一种从钨矿尾矿中分离出的产二甲基二硫的细菌。
Int J Syst Evol Microbiol. 2016 Jan;66(1):50-55. doi: 10.1099/ijsem.0.000670. Epub 2015 Oct 8.
9
An iterative type I polyketide synthase initiates the biosynthesis of the antimycoplasma agent micacocidin.一种迭代型I聚酮合酶启动抗支原体药物米卡考菌素的生物合成。
Chem Biol. 2013 Jun 20;20(6):764-71. doi: 10.1016/j.chembiol.2013.04.010.
10
Genomics-driven discovery of taiwachelin, a lipopeptide siderophore from Cupriavidus taiwanensis.基于基因组学的研究发现了台湾假单胞菌的脂肽类铁载体 taiwachelin。
Org Biomol Chem. 2012 Dec 21;10(47):9338-43. doi: 10.1039/c2ob26296g. Epub 2012 Sep 12.

引用本文的文献

1
Functional diversity of bacterial microbiota associated with the toxigenic benthic dinoflagellate Prorocentrum.与产毒底栖甲藻夜光藻相关的细菌微生物群落的功能多样性。
PLoS One. 2024 Jul 16;19(7):e0306108. doi: 10.1371/journal.pone.0306108. eCollection 2024.
2
Intermediates and shunt products of massiliachelin biosynthesis in sp. NR 4-1.马赛菌素生物合成在sp. NR 4-1中的中间体和分流产物。
Beilstein J Org Chem. 2023 Jun 23;19:909-917. doi: 10.3762/bjoc.19.69. eCollection 2023.
3
The intriguing chemistry and biology of sulfur-containing natural products from marine microorganisms (1987-2020).

本文引用的文献

1
The antiSMASH database version 2: a comprehensive resource on secondary metabolite biosynthetic gene clusters.反物质 SMASH 数据库版本 2:二次代谢生物合成基因簇的综合资源。
Nucleic Acids Res. 2019 Jan 8;47(D1):D625-D630. doi: 10.1093/nar/gky1060.
2
Collimonins A-D, Unstable Polyynes with Antifungal or Pigmentation Activities from the Fungus-Feeding Bacterium Collimonas fungivorans Ter331.从菌食性细菌 Collimonas fungivorans Ter331 中分离得到的不稳定聚炔类化合物 Collimonins A-D,具有抗真菌或色素生成活性。
Org Lett. 2018 Jun 15;20(12):3536-3540. doi: 10.1021/acs.orglett.8b01311. Epub 2018 May 24.
3
Antimicrobial discovery inspired by ecological interactions.
海洋微生物含硫天然产物的有趣化学与生物学研究(1987 - 2020年)
Mar Life Sci Technol. 2021 May 19;3(4):488-518. doi: 10.1007/s42995-021-00101-2. eCollection 2021 Nov.
4
Nitrogen Fertilizer Type and Genotype as Drivers of P Acquisition and Rhizosphere Microbiota Assembly in Juvenile Maize Plants.氮肥类型和基因型作为影响玉米幼苗磷素吸收及根际微生物群组装的驱动因素
Plants (Basel). 2023 Jan 25;12(3):544. doi: 10.3390/plants12030544.
5
Impact of high Fe-concentrations on microbial community structure and dissolved organics in hydrothermal plumes: an experimental study.高温热液羽流中高浓度铁对微生物群落结构和溶解有机物的影响:一项实验研究。
Sci Rep. 2022 Dec 1;12(1):20723. doi: 10.1038/s41598-022-25320-0.
6
Draft Genome Sequences of the Three Strains AB1, ST3, and ZL223.三株菌株AB1、ST3和ZL223的基因组序列草图
Microbiol Resour Announc. 2021 Jul 29;10(30):e0045121. doi: 10.1128/MRA.00451-21.
7
Draft Genome Sequences of Six Type Strains of the Genus .属六种模式菌株的基因组序列草图
Microbiol Resour Announc. 2020 Apr 30;9(18):e00226-20. doi: 10.1128/MRA.00226-20.
受生态相互作用启发的抗菌药物发现。
Curr Opin Microbiol. 2017 Oct;39:121-127. doi: 10.1016/j.mib.2017.09.006. Epub 2017 Nov 21.
4
Antibiotics from Gram-negative bacteria: a comprehensive overview and selected biosynthetic highlights.革兰氏阴性菌来源的抗生素:全面概述及部分生物合成亮点。
Nat Prod Rep. 2017 Jul 1;34(7):712-783. doi: 10.1039/c7np00010c. Epub 2017 Jun 26.
5
antiSMASH 4.0-improvements in chemistry prediction and gene cluster boundary identification.antiSMASH 4.0——化学预测和基因簇边界识别的改进。
Nucleic Acids Res. 2017 Jul 3;45(W1):W36-W41. doi: 10.1093/nar/gkx319.
6
Complete genome sequence of antibiotic and anticancer agent violacein producing Massilia sp. strain NR 4-1.产抗生素和抗癌剂紫菌素的马赛菌属菌株NR 4-1的全基因组序列
J Biotechnol. 2016 Apr 10;223:36-7. doi: 10.1016/j.jbiotec.2016.02.027. Epub 2016 Feb 23.
7
Bioactive natural products from novel microbial sources.新型微生物来源的生物活性天然产物。
Ann N Y Acad Sci. 2015 Sep;1354:82-97. doi: 10.1111/nyas.12954.
8
A new antibiotic kills pathogens without detectable resistance.一种新型抗生素能杀死病原体且未检测到耐药性。
Nature. 2015 Jan 22;517(7535):455-9. doi: 10.1038/nature14098. Epub 2015 Jan 7.
9
Biosynthetic genes and activity spectrum of antifungal polyynes from Collimonas fungivorans Ter331.《地霉属真菌 Collimonas fungivorans Ter331 中抗真菌多炔的生物合成基因和活性谱》。
Environ Microbiol. 2014 May;16(5):1334-45. doi: 10.1111/1462-2920.12440. Epub 2014 Mar 27.
10
An iterative type I polyketide synthase initiates the biosynthesis of the antimycoplasma agent micacocidin.一种迭代型I聚酮合酶启动抗支原体药物米卡考菌素的生物合成。
Chem Biol. 2013 Jun 20;20(6):764-71. doi: 10.1016/j.chembiol.2013.04.010.