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卷曲螺旋结构域移位在货物结合时人双尾D2激活动力蛋白募集过程中的作用

Role of Coiled-Coil Registry Shifts in the Activation of Human Bicaudal D2 for Dynein Recruitment upon Cargo Binding.

作者信息

Noell Crystal R, Loh Jia Ying, Debler Erik W, Loftus Kyle M, Cui Heying, Russ Blaine B, Zhang Kaiqi, Goyal Puja, Solmaz Sozanne R

机构信息

Department of Chemistry , State University of New York at Binghamton , P.O. Box 6000, Binghamton , New York 13902 , United States.

Department of Biochemistry & Molecular Biology , Thomas Jefferson University , 1020 Locust Street , Philadelphia , Pennsylvania 19107 , United States.

出版信息

J Phys Chem Lett. 2019 Aug 1;10(15):4362-4367. doi: 10.1021/acs.jpclett.9b01865. Epub 2019 Jul 22.

Abstract

Dynein adaptors such as Bicaudal D2 (BicD2) recognize cargo for dynein-dependent transport, and cargo-bound adaptors are required to activate dynein for processive transport, but the mechanism of action is unknown. Here we report the X-ray structure of the cargo-binding domain of human BicD2 and investigate the structural dynamics of the coiled-coil. Our molecular dynamics simulations support the fact that BicD2 can switch from a homotypic coiled-coil registry, in which both helices of the homodimer are aligned, to an asymmetric registry, where a portion of one helix is vertically shifted, as both states are similarly stable and defined by distinct conformations of F743. The F743I variant increases dynein recruitment in the homologue, whereas the human R747C variant causes spinal muscular atrophy. We report spontaneous registry shifts for both variants, which may be the cause for BicD2 hyperactivation and disease. We propose that a registry shift upon cargo binding may activate autoinhibited BicD2 for dynein recruitment.

摘要

诸如双尾D2(BicD2)之类的动力蛋白衔接蛋白识别用于动力蛋白依赖性运输的货物,并且需要与货物结合的衔接蛋白来激活动力蛋白以进行持续性运输,但其作用机制尚不清楚。在这里,我们报告了人类BicD2货物结合域的X射线结构,并研究了卷曲螺旋的结构动力学。我们的分子动力学模拟支持以下事实:BicD2可以从同型卷曲螺旋排列(其中同二聚体的两个螺旋对齐)转变为不对称排列,即一个螺旋的一部分垂直移位,因为这两种状态同样稳定且由F743的不同构象定义。F743I变体增加了同源物中动力蛋白的募集,而人类R747C变体导致脊髓性肌萎缩症。我们报告了这两种变体的自发排列移位,这可能是BicD2过度激活和疾病的原因。我们提出,货物结合时的排列移位可能会激活自抑制的BicD2以募集动力蛋白。

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本文引用的文献

1
A Quantitative Model for BicD2/Cargo Interactions.
Biochemistry. 2018 Nov 20;57(46):6538-6550. doi: 10.1021/acs.biochem.8b00987. Epub 2018 Nov 5.
2
RNA-directed activation of cytoplasmic dynein-1 in reconstituted transport RNPs.
Elife. 2018 Jun 26;7:e36312. doi: 10.7554/eLife.36312.
3
Recruitment of two dyneins to an mRNA-dependent Bicaudal D transport complex.
Elife. 2018 Jun 26;7:e36306. doi: 10.7554/eLife.36306.
5
Mechanism for G2 phase-specific nuclear export of the kinetochore protein CENP-F.
Cell Cycle. 2017 Aug 3;16(15):1414-1429. doi: 10.1080/15384101.2017.1338218. Epub 2017 Jul 19.
6
Dominant spinal muscular atrophy is caused by mutations in BICD2, an important golgin protein.
Front Neurosci. 2015 Nov 5;9:401. doi: 10.3389/fnins.2015.00401. eCollection 2015.
7
Mechanism and regulation of cytoplasmic dynein.
Annu Rev Cell Dev Biol. 2015;31:83-108. doi: 10.1146/annurev-cellbio-100814-125438. Epub 2015 Sep 30.
8
Cdk1 Activates Pre-mitotic Nuclear Envelope Dynein Recruitment and Apical Nuclear Migration in Neural Stem Cells.
Dev Cell. 2015 Jun 22;33(6):703-16. doi: 10.1016/j.devcel.2015.04.022. Epub 2015 Jun 4.
9
The structure of the dynactin complex and its interaction with dynein.
Science. 2015 Mar 27;347(6229):1441-1446. doi: 10.1126/science.aaa4080. Epub 2015 Feb 12.
10
Structural basis for cargo binding and autoinhibition of Bicaudal-D1 by a parallel coiled-coil with homotypic registry.
Biochem Biophys Res Commun. 2015 May 1;460(2):451-6. doi: 10.1016/j.bbrc.2015.03.054. Epub 2015 Mar 18.

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