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测量植物生物钟中依赖光敏色素的光输入

Measuring Phytochrome-Dependent Light Input to the Plant Circadian Clock.

作者信息

Oakenfull Rachael J, Ronald James, Davis Seth J

机构信息

Department of Biology, University of York, York, UK.

出版信息

Methods Mol Biol. 2019;2026:179-192. doi: 10.1007/978-1-4939-9612-4_15.

DOI:10.1007/978-1-4939-9612-4_15
PMID:31317413
Abstract

The circadian clock allows plants to synchronize their internal processes with the external environment. This synchronization occurs through daily cues, one of which is light. Phytochromes are well established as light-sensing proteins and have been identified in forming multiple signaling networks with the central circadian oscillator. However, the precise details of how these networks are formed are yet to be established. Using established promoter-luciferase lines for clock genes crossed into mutant lines, it is possible to use luciferase-based imaging technologies to determine whether specific proteins are involved in phytochrome signaling to the circadian oscillator. The methods presented here use two automated methods of luciferase imaging in Arabidopsis to allow for high-throughput measurement of circadian clock components under a range of different light conditions.

摘要

生物钟使植物能够将其内部过程与外部环境同步。这种同步通过每日的信号线索来实现,其中之一就是光。光敏色素作为光感应蛋白已被充分确立,并且已被确定在与中央生物钟振荡器形成多个信号网络中发挥作用。然而,这些网络如何形成的精确细节尚未确定。利用已建立的用于时钟基因的启动子-荧光素酶系与突变体系杂交,可以使用基于荧光素酶的成像技术来确定特定蛋白质是否参与了向生物钟振荡器的光敏色素信号传导。这里介绍的方法使用了拟南芥中两种荧光素酶成像的自动化方法,以便在一系列不同光照条件下对生物钟组件进行高通量测量。

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Osmotic stress at the barley root affects expression of circadian clock genes in the shoot.大麦根部的渗透胁迫会影响地上部分生物钟基因的表达。
Plant Cell Environ. 2014 Jun;37(6):1321-7. doi: 10.1111/pce.12242.
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Strengths and limitations of period estimation methods for circadian data.昼夜节律数据周期估计方法的优势与局限性。
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Mathematical modeling of an oscillating gene circuit to unravel the circadian clock network of Arabidopsis thaliana.
利用振荡基因电路的数学模型揭示拟南芥生物钟网络。
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Environmental memory from a circadian oscillator: the Arabidopsis thaliana clock differentially integrates perception of photic vs. thermal entrainment.环境记忆来自生物钟振荡器:拟南芥时钟差异整合了对光和热的感知。
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Light inputs shape the Arabidopsis circadian system.光输入塑造了拟南芥的生物钟系统。
Plant J. 2011 May;66(3):480-91. doi: 10.1111/j.1365-313X.2011.04505.x. Epub 2011 Mar 4.
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Temporal repression of core circadian genes is mediated through EARLY FLOWERING 3 in Arabidopsis.拟南芥中通过 EARLY FLOWERING 3 介导的核心生物钟基因的时间抑制。
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Ambient temperature response establishes ELF3 as a required component of the core Arabidopsis circadian clock.环境温度响应确立 ELF3 为拟南芥核心生物钟的必需组成部分。
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