Department of Biochemistry and Molecular Biology, Sealy Center for Structural Biology and Molecular Biophysics, University of Texas Medical Branch, 301 University Blvd, Galveston, TX 77555-0647, USA; École Polytechnique Fédérale de Lausanne, Lausanne CH-1015, Switzerland.
Laboratory of Molecular Bioengineering, Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, 16/10 Miklukho-Maklaya St., 117997 Moscow, Russia.
J Mol Biol. 2019 Sep 6;431(19):3718-3739. doi: 10.1016/j.jmb.2019.07.022. Epub 2019 Jul 17.
Bacteriophages recognize their host cells with the help of tail fiber and tailspike proteins that bind, cleave, or modify certain structures on the cell surface. The spectrum of ligands to which the tail fibers and tailspikes can bind is the primary determinant of the host range. Bacteriophages with multiple tailspike/tail fibers are thought to have a wider host range than their less endowed relatives but the function of these proteins remains poorly understood. Here, we describe the structure, function, and substrate specificity of three tailspike proteins of bacteriophage CBA120-TSP2, TSP3 and TSP4 (orf211 through orf213, respectively). We show that tailspikes TSP2, TSP3 and TSP4 are hydrolases that digest the O157, O77, and O78 Escherichia coli O-antigens, respectively. We demonstrate that recognition of the E. coli O157:H7 host by CBA120 involves binding to and digesting the O157 O-antigen by TSP2. We report the crystal structure of TSP2 in complex with a repeating unit of the O157 O-antigen. We demonstrate that according to the specificity of its tailspikes TSP2, TSP3, and TSP4, CBA120 can infect E. coli O157, O77, and O78, respectively. We also show that CBA120 infects Salmonella enterica serovar Minnesota, and this host range expansion is likely due to the function of TSP1. Finally, we describe the assembly pathway and the architecture of the TSP1-TSP2-TSP3-TSP4 branched complex in CBA120 and its related ViI-like phages.
噬菌体借助尾纤维和尾刺蛋白识别宿主细胞,这些蛋白结合、切割或修饰细胞表面的某些结构。尾纤维和尾刺蛋白可以结合的配体谱是决定宿主范围的主要决定因素。具有多个尾刺/尾纤维的噬菌体被认为比它们资源较少的同类具有更广泛的宿主范围,但这些蛋白质的功能仍知之甚少。在这里,我们描述了噬菌体 CBA120-TSP2、TSP3 和 TSP4(分别为 orf211 到 orf213)的三个尾刺蛋白的结构、功能和底物特异性。我们表明,尾刺蛋白 TSP2、TSP3 和 TSP4 是水解酶,分别消化大肠杆菌 O157、O77 和 O78 O-抗原。我们证明,CBA120 识别大肠杆菌 O157:H7 宿主涉及与 TSP2 结合并消化 O157 O-抗原。我们报告了 TSP2 与 O157 O-抗原重复单元复合物的晶体结构。我们表明,根据其尾刺蛋白 TSP2、TSP3 和 TSP4 的特异性,CBA120 分别可以感染大肠杆菌 O157、O77 和 O78。我们还表明,CBA120 感染肠炎沙门氏菌血清型明尼苏达,这种宿主范围的扩大可能是由于 TSP1 的功能。最后,我们描述了 CBA120 及其相关 ViI 样噬菌体中 TSP1-TSP2-TSP3-TSP4 分支复合物的组装途径和结构。