Korean Collection for Oral Microbiology and Department of Oral Biochemistry, School of Dentistry, Chosun University, Gwangju, Republic of Korea.
Department of Laboratory Medicine, Inje University College of Medicine, Busan, Republic of Korea.
Curr Microbiol. 2019 Oct;76(10):1193-1198. doi: 10.1007/s00284-019-01746-0. Epub 2019 Jul 22.
A novel facultative anaerobic, non-spore forming, non-motile, and Gram-stain-positive coccus, designated strain ChDC B353, was isolated from human postoperative maxillary cyst. The 16S ribosomal RNA gene (16S rDNA) sequence of the strain was most closely related to those of Streptococcus pseudopneumoniae ATCC BAA-960 (99.4%), Streptococcus mitis NCTC 12261 (99.3%), and Streptococcus pneumoniae NCTC 7465 (99.2%). The major fatty acids of the strain were C (43.2%) and C/C (20.2%). The genome of strain ChDC B353 was composed of 1,902,053 bps. The DNA G+C content of the strain was 40.2 mol%. Average nucleotide identity (ANI) values between strain ChDC B353 and S. pseudopneumoniae ATCC BAA-960, S. mitis NCTC 12261, and S. pneumoniae NCTC 7465 were 91.9%, 93.5%, and 91.3%, respectively. Genome-to-genome distance (GGD) values between strain ChDC B353 and S. pseudopneumoniae ATCC BAA-960, S. mitis NCTC 12261, or S. pneumoniae NCTC 7465 were 46.6% (44.0-49.2%), 53.2% (50.5-55.9%), and 46.0% (43.5-48.7%), respectively. The threshold values of ANI and GGD for species discrimination are 95-96% and 70%, respectively. These results reveal that strain ChDC B353 (= KCOM 1699 = JCM 33453) is a novel species belonging to genus Streptococcus, for which a name of Streptococcus chosunense sp. nov. is proposed.
一株新的兼性厌氧、非芽孢形成、非运动、革兰氏阳性球菌,被命名为 ChDC B353 株,从人类上颌窦术后囊肿中分离得到。该菌株的 16S 核糖体 RNA 基因(16S rDNA)序列与肺炎链球菌 ATCC BAA-960(99.4%)、口腔链球菌 NCTC 12261(99.3%)和肺炎链球菌 NCTC 7465(99.2%)最为密切相关。该菌株的主要脂肪酸为 C(43.2%)和 C/C(20.2%)。菌株 ChDC B353 的基因组由 1,902,053 bps 组成。该菌株的 DNA G+C 含量为 40.2 mol%。菌株 ChDC B353 与肺炎链球菌 ATCC BAA-960、口腔链球菌 NCTC 12261 和肺炎链球菌 NCTC 7465 的平均核苷酸同一性(ANI)值分别为 91.9%、93.5%和 91.3%。菌株 ChDC B353 与肺炎链球菌 ATCC BAA-960、口腔链球菌 NCTC 12261 或肺炎链球菌 NCTC 7465 的基因组到基因组距离(GGD)值分别为 46.6%(44.0-49.2%)、53.2%(50.5-55.9%)和 46.0%(43.5-48.7%)。ANI 和 GGD 的物种区分阈值分别为 95-96%和 70%。这些结果表明,菌株 ChDC B353(=KCOM 1699=JCM 33453)是一种新的链球菌属物种,建议将其命名为朝鲜链球菌(Streptococcus chosunense)。