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新属,新种,从酸性矿山排水中分离得到。

gen. nov., sp. nov., isolated from acidic mine drainage.

机构信息

University of Chinese Academy of Sciences, Beijing 100049, PR China.

State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, PR China.

出版信息

Int J Syst Evol Microbiol. 2019 Oct;69(10):3248-3255. doi: 10.1099/ijsem.0.003618. Epub 2019 Jul 29.

Abstract

A heterotrophic and acidophilic bacterial strain, G45-3, was isolated from acidic mine drainage sampled in Fujian Province, PR China. Cells of strain G45-3 were Gram-stain-negative, non-spore-forming, non-motile and rod-shaped. Catalase and oxidase activities were positive. Strain G45-3 grew aerobically at 20-45 °C (optimum, 37 °C) and at pH 2.5-5.0 (optimum, pH 4.0). Photosynthetic pigments were not produced. Analysis of 16S rRNA gene sequences showed that strain G45-3 was phylogenetically related to different members of the family , and the sequence identities to JCM 10600, G2-11 and ATCC 35887 were 95.9 , 95.3 and 95.3 %, respectively. Strain G45-3 contained ubiquinone-10 as its respiratory quinone. The major polar lipids were determined to be diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine, an unidentified aminophospholipid and an unidentified aminolipid. The predominant fatty acids were cyclo-Cω8, Cω7, C and C. The genome of G45-3 consists of one chromosome (3 907 406 bp) and three plasmids (68 344, 45 771 and 16 090 bp), with an average G+C content of 65.9 mol%. Based on the results of phenotypic and genomic analyses, it is concluded that strain G45-3 represents a novel species of a new genus, for which the name gen. nov., sp. nov. is proposed. is nominated as type species and its type strain is G45-3 (=CGMCC 1.16069=KCTC 62275).

摘要

一株异养嗜酸细菌菌株 G45-3 从中国福建省的酸性矿山排水中分离得到。菌株 G45-3 的细胞革兰氏染色阴性,不形成孢子,不运动,呈杆状。细胞具有触酶和氧化酶活性。菌株 G45-3 能够在有氧条件下生长,最适生长温度为 37℃,最适生长 pH 值为 4.0。菌株 G45-3 不产生光合色素。16S rRNA 基因序列分析表明,菌株 G45-3 与不同属的不同成员亲缘关系密切,与 JCM 10600、G2-11 和 ATCC 35887 的序列相似性分别为 95.9%、95.3%和 95.3%。菌株 G45-3 含有泛醌-10 作为其呼吸醌。主要极性脂为二磷脂酰甘油、磷脂酰甘油、磷脂酰乙醇胺、磷脂酰胆碱、一种未鉴定的氨基磷脂和一种未鉴定的氨基脂。主要脂肪酸为环-Cω8、Cω7、C 和 C。G45-3 的基因组由一条染色体(3907406bp)和三条质粒(68344、45771 和 16090bp)组成,GC 含量为 65.9mol%。基于表型和基因组分析的结果,菌株 G45-3 代表一个新属的新种,建议采用新属名. gen. nov.,新种名. sp. nov.。 被命名为模式种,其模式菌株为 G45-3(=CGMCC 1.16069=KCTC 62275)。

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