产己酸细菌嗜半乳糖醇己酸生产菌BS-1（JCM 30532）的基因组序列
Genome Sequence of the Caproic Acid-Producing Bacterium Caproiciproducens galactitolivorans BS-1 (JCM 30532).
作者信息
Bengelsdorf Frank R, Poehlein Anja, Daniel Rolf, Dürre Peter
机构信息
Institut für Mikrobiologie und Biotechnologie, Universität Ulm, Ulm, Germany.
Genomic and Applied Microbiology & Göttingen Genomics Laboratory, Georg-August University Göttingen, Göttingen, Germany.
出版信息
Microbiol Resour Announc. 2019 Aug 1;8(31):e00346-19. doi: 10.1128/MRA.00346-19.
Abstract
BS-1 is an anaerobic bacterium that produces acetate, butyrate, and caproate. The genome has a size of 2.57 Mbp and harbors 2,439 predicted protein-coding genes.
摘要
BS-1是一种能产生乙酸盐、丁酸盐和己酸盐的厌氧细菌。其基因组大小为2.57兆碱基对，包含2439个预测的蛋白质编码基因。
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本文引用的文献
1
The Rnf Complex Is an Energy-Coupled Transhydrogenase Essential To Reversibly Link Cellular NADH and Ferredoxin Pools in the Acetogen Acetobacterium woodii.
J Bacteriol. 2018 Oct 10;200(21). doi: 10.1128/JB.00357-18. Print 2018 Nov 1.
2
Bacterial Anaerobic Synthesis Gas (Syngas) and CO+H Fermentation.
Adv Appl Microbiol. 2018;103:143-221. doi: 10.1016/bs.aambs.2018.01.002. Epub 2018 Mar 16.
3
Caproiciproducens galactitolivorans gen. nov., sp. nov., a bacterium capable of producing caproic acid from galactitol, isolated from a wastewater treatment plant.
Int J Syst Evol Microbiol. 2015 Dec;65(12):4902-4908. doi: 10.1099/ijsem.0.000665. Epub 2015 Oct 14.
4
Butanol and hexanol production in Clostridium carboxidivorans syngas fermentation: Medium development and culture techniques.
Bioresour Technol. 2015 Aug;190:114-21. doi: 10.1016/j.biortech.2015.04.043. Epub 2015 Apr 22.
5
Autotrophy at the thermodynamic limit of life: a model for energy conservation in acetogenic bacteria.
Nat Rev Microbiol. 2014 Dec;12(12):809-21. doi: 10.1038/nrmicro3365. Epub 2014 Nov 10.
6
Trimmomatic: a flexible trimmer for Illumina sequence data.
Bioinformatics. 2014 Aug 1;30(15):2114-20. doi: 10.1093/bioinformatics/btu170. Epub 2014 Apr 1.
7
Prokka: rapid prokaryotic genome annotation.
Bioinformatics. 2014 Jul 15;30(14):2068-9. doi: 10.1093/bioinformatics/btu153. Epub 2014 Mar 18.
8
A serendipic legacy: Erwin Esmarch's isolation of the first photosynthetic bacterium in pure culture.
Photosynth Res. 1995 Jan;46(3):473-8. doi: 10.1007/BF00032302.
9
In situ extractive fermentation for the production of hexanoic acid from galactitol by Clostridium sp. BS-1.
Enzyme Microb Technol. 2013 Aug 15;53(3):143-51. doi: 10.1016/j.enzmictec.2013.02.008. Epub 2013 Feb 26.
10
Qualimap: evaluating next-generation sequencing alignment data.
Bioinformatics. 2012 Oct 15;28(20):2678-9. doi: 10.1093/bioinformatics/bts503. Epub 2012 Aug 22.
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