• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

用于生物制造和生物精炼的高效蛋白质分泌与脂质转化的机制导向设计

Mechanism-Guided Design of Highly Efficient Protein Secretion and Lipid Conversion for Biomanufacturing and Biorefining.

作者信息

Xie Shangxian, Sun Su, Lin Furong, Li Muzi, Pu Yunqiao, Cheng Yanbing, Xu Bing, Liu Zhihua, da Costa Sousa Leonardo, Dale Bruce E, Ragauskas Arthur J, Dai Susie Y, Yuan Joshua S

机构信息

Synthetic and Systems Biology Innovation Hub and Department of Plant Pathology and Microbiology Texas A&M University College Station TX 77843 USA.

Joint Institute for Biological Sciences and Biosciences Division Oak Ridge National Laboratory Oak Ridge TN 37831 USA.

出版信息

Adv Sci (Weinh). 2019 May 1;6(13):1801980. doi: 10.1002/advs.201801980. eCollection 2019 Jul 3.

DOI:10.1002/advs.201801980
PMID:31380177
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6662401/
Abstract

Bacterial protein secretion represents a significant challenge in biotechnology, which is essential for the cost-effective production of therapeutics, enzymes, and other functional proteins. Here, it is demonstrated that proteomics-guided engineering of transcription, translation, secretion, and folding of ligninolytic laccase balances the process, minimizes the toxicity, and enables efficient heterologous secretion with a total protein yield of 13.7 g L. The secretory laccase complements the biochemical limits on lignin depolymerization well in PD630. Further proteomics analysis reveals the mechanisms for the oleaginous phenotype of PD630, where a distinct multiunit fatty acid synthase I drives the carbon partition to storage lipid. The discovery guides the design of efficient lipid conversion from lignin and carbohydrate. The proteomics-guided integration of laccase-secretion and lipid production modules enables a high titer in converting lignin-enriched biorefinery waste to lipid. The fundamental mechanisms, engineering components, and design principle can empower transformative platforms for biomanufacturing and biorefining.

摘要

细菌蛋白质分泌是生物技术领域的一项重大挑战,而这对于经济高效地生产治疗药物、酶及其他功能蛋白至关重要。在此,研究表明,通过蛋白质组学指导对木质素分解漆酶的转录、翻译、分泌和折叠进行工程改造,可平衡该过程、将毒性降至最低,并实现高效异源分泌,总蛋白产量达13.7 g/L。分泌型漆酶在PD630中很好地补充了木质素解聚的生化限制。进一步的蛋白质组学分析揭示了PD630产油表型的机制,其中独特的多亚基脂肪酸合酶I驱动碳分配至储存脂质。这一发现为从木质素和碳水化合物高效转化脂质的设计提供了指导。蛋白质组学指导下的漆酶分泌和脂质生产模块整合,能够实现将富含木质素的生物精炼废料高效转化为脂质。这些基本机制、工程组件和设计原则可为生物制造和生物精炼的变革性平台提供支持。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d3b/6662401/9a81211ab510/ADVS-6-1801980-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d3b/6662401/02dbc75a7d95/ADVS-6-1801980-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d3b/6662401/62108a7c659f/ADVS-6-1801980-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d3b/6662401/a04a74430cf4/ADVS-6-1801980-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d3b/6662401/92c9b847b598/ADVS-6-1801980-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d3b/6662401/88843d4bf6c2/ADVS-6-1801980-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d3b/6662401/9a81211ab510/ADVS-6-1801980-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d3b/6662401/02dbc75a7d95/ADVS-6-1801980-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d3b/6662401/62108a7c659f/ADVS-6-1801980-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d3b/6662401/a04a74430cf4/ADVS-6-1801980-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d3b/6662401/92c9b847b598/ADVS-6-1801980-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d3b/6662401/88843d4bf6c2/ADVS-6-1801980-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d3b/6662401/9a81211ab510/ADVS-6-1801980-g006.jpg

相似文献

1
Mechanism-Guided Design of Highly Efficient Protein Secretion and Lipid Conversion for Biomanufacturing and Biorefining.用于生物制造和生物精炼的高效蛋白质分泌与脂质转化的机制导向设计
Adv Sci (Weinh). 2019 May 1;6(13):1801980. doi: 10.1002/advs.201801980. eCollection 2019 Jul 3.
2
Highly efficient polyhydroxyalkanoate production from lignin using genetically engineered Halomonas sp. Y3.利用基因工程 Halomonas sp. Y3 从木质素生产高效聚羟基烷酸酯。
Bioresour Technol. 2023 Feb;370:128526. doi: 10.1016/j.biortech.2022.128526. Epub 2022 Dec 23.
3
A key -demethylase in the degradation of guaiacol by PD630.漆酶 PD630 降解愈创木酚的关键去甲基酶。
Appl Environ Microbiol. 2023 Oct 31;89(10):e0052223. doi: 10.1128/aem.00522-23. Epub 2023 Oct 6.
4
Combinatorial pretreatment and fermentation optimization enabled a record yield on lignin bioconversion.组合预处理和发酵优化实现了木质素生物转化的创纪录产量。
Biotechnol Biofuels. 2018 Jan 29;11:21. doi: 10.1186/s13068-018-1021-3. eCollection 2018.
5
Discovery of potential pathways for biological conversion of poplar wood into lipids by co-fermentation of strains.通过菌株共发酵将杨树木材生物转化为脂质的潜在途径的发现。
Biotechnol Biofuels. 2019 Mar 19;12:60. doi: 10.1186/s13068-019-1395-x. eCollection 2019.
6
Development of as a chassis for lignin valorization and bioproduction of high-value compounds.作为木质素增值和高价值化合物生物生产底盘的开发。
Biotechnol Biofuels. 2019 Aug 5;12:192. doi: 10.1186/s13068-019-1535-3. eCollection 2019.
7
Integrated omics study delineates the dynamics of lipid droplets in Rhodococcus opacus PD630.综合组学研究描绘了 Rhodococcus opacus PD630 中脂滴的动态变化。
Nucleic Acids Res. 2014 Jan;42(2):1052-64. doi: 10.1093/nar/gkt932. Epub 2013 Oct 22.
8
The atf2 gene is involved in triacylglycerol biosynthesis and accumulation in the oleaginous Rhodococcus opacus PD630.atf2 基因参与了产油 Rhodococcus opacus PD630 中三酰基甘油的生物合成和积累。
Appl Microbiol Biotechnol. 2013 Mar;97(5):2119-30. doi: 10.1007/s00253-012-4360-1. Epub 2012 Aug 29.
9
Deciphering the metabolic distribution of vanillin in Rhodococcus opacus during lignin valorization.解析木质素增值过程中红球菌中香草醛的代谢分布。
Bioresour Technol. 2022 Mar;347:126348. doi: 10.1016/j.biortech.2021.126348. Epub 2021 Nov 16.
10
Comparative and functional genomics of Rhodococcus opacus PD630 for biofuels development.用于生物燃料开发的罗尔斯通氏菌 PD630 的比较和功能基因组学。
PLoS Genet. 2011 Sep;7(9):e1002219. doi: 10.1371/journal.pgen.1002219. Epub 2011 Sep 8.

引用本文的文献

1
Structural Homology Fails to Predict Secretion Efficiency in : Divergent Responses of Architecturally Similar scFvs to Multi-Parametric Genetic Engineering.结构同源性无法预测:结构相似的单链抗体片段(scFvs)对多参数基因工程的不同反应中的分泌效率。
Int J Mol Sci. 2025 May 21;26(10):4922. doi: 10.3390/ijms26104922.
2
Benzenoid Aromatics from Renewable Resources.来自可再生资源的苯型芳烃。
Chem Rev. 2024 Oct 9;124(19):10701-10876. doi: 10.1021/acs.chemrev.4c00087. Epub 2024 Sep 17.
3
Increased triacylglycerol production in Rhodococcus opacus by overexpressing transcriptional regulators.

本文引用的文献

1
Efficient expression of full-length antibodies in the cytoplasm of engineered bacteria.全长抗体在工程菌细胞质中的高效表达。
Nat Commun. 2015 Aug 27;6:8072. doi: 10.1038/ncomms9072.
2
Microfluidic screening and whole-genome sequencing identifies mutations associated with improved protein secretion by yeast.微流控筛选和全基因组测序鉴定出与酵母蛋白分泌改善相关的突变。
Proc Natl Acad Sci U S A. 2015 Aug 25;112(34):E4689-96. doi: 10.1073/pnas.1506460112. Epub 2015 Aug 10.
3
Enzymatic conversion of lignin into renewable chemicals.
通过过表达转录调节因子提高不透明红球菌中三酰甘油的产量。
Biotechnol Biofuels Bioprod. 2024 Jun 19;17(1):83. doi: 10.1186/s13068-024-02523-3.
4
Bacterial transformation of lignin: key enzymes and high-value products.木质素的细菌转化:关键酶和高价值产物
Biotechnol Biofuels Bioprod. 2024 Jan 3;17(1):2. doi: 10.1186/s13068-023-02447-4.
5
A key -demethylase in the degradation of guaiacol by PD630.漆酶 PD630 降解愈创木酚的关键去甲基酶。
Appl Environ Microbiol. 2023 Oct 31;89(10):e0052223. doi: 10.1128/aem.00522-23. Epub 2023 Oct 6.
6
Lytic polysaccharide monooxygenase synergized with lignin-degrading enzymes for efficient lignin degradation.裂解多糖单加氧酶与木质素降解酶协同作用以实现高效的木质素降解。
iScience. 2023 Sep 9;26(10):107870. doi: 10.1016/j.isci.2023.107870. eCollection 2023 Oct 20.
7
Fungal-Modified Lignin-Enhanced Physicochemical Properties of Collagen-Based Composite Films.真菌改性木质素增强了胶原基复合膜的物理化学性质。
J Fungi (Basel). 2022 Dec 16;8(12):1303. doi: 10.3390/jof8121303.
8
Deciphering the transcriptional regulation of the catabolism of lignin-derived aromatics in Rhodococcus opacus PD630.解析红平红球菌 PD630 中木质素衍生芳香族化合物分解代谢的转录调控。
Commun Biol. 2022 Oct 19;5(1):1109. doi: 10.1038/s42003-022-04069-2.
9
Lignocellulose dissociation with biological pretreatment towards the biochemical platform: A review.木质纤维素通过生物预处理向生化平台的解离:综述
Mater Today Bio. 2022 Sep 28;16:100445. doi: 10.1016/j.mtbio.2022.100445. eCollection 2022 Dec.
10
Endophytes in Lignin Valorization: A Novel Approach.木质素增值中的内生菌:一种新方法。
Front Bioeng Biotechnol. 2022 Jul 19;10:895414. doi: 10.3389/fbioe.2022.895414. eCollection 2022.
木质素的酶促转化为可再生化学品。
Curr Opin Chem Biol. 2015 Dec;29:10-7. doi: 10.1016/j.cbpa.2015.06.009. Epub 2015 Jun 26.
4
Lignin valorization through integrated biological funneling and chemical catalysis.通过集成生物趋化和化学催化实现木质素增值。
Proc Natl Acad Sci U S A. 2014 Aug 19;111(33):12013-8. doi: 10.1073/pnas.1410657111. Epub 2014 Aug 4.
5
Lignin valorization: improving lignin processing in the biorefinery.木质素增值利用:改善生物炼制厂中的木质素加工。
Science. 2014 May 16;344(6185):1246843. doi: 10.1126/science.1246843.
6
Exploration of Natural Biomass Utilization Systems (NBUS) for advanced biofuel--from systems biology to synthetic design.探索用于先进生物燃料的天然生物质利用系统(NBUS)——从系统生物学到合成设计。
Curr Opin Biotechnol. 2014 Jun;27:195-203. doi: 10.1016/j.copbio.2014.02.007. Epub 2014 Mar 19.
7
Engineering xylose metabolism in triacylglycerol-producing Rhodococcus opacus for lignocellulosic fuel production.在产三酰甘油的红球菌中工程化木糖代谢途径用于木质纤维素燃料生产。
Biotechnol Biofuels. 2013 Sep 16;6(1):134. doi: 10.1186/1754-6834-6-134.
8
Application of an improved proteomics method for abundant protein cleanup: molecular and genomic mechanisms study in plant defense.一种改进的蛋白质组学方法在丰富蛋白质清除中的应用:植物防御中的分子和基因组机制研究。
Mol Cell Proteomics. 2013 Nov;12(11):3431-42. doi: 10.1074/mcp.M112.025213. Epub 2013 Aug 13.
9
Understanding pulp delignification by laccase-mediator systems through isolation and characterization of lignin-carbohydrate complexes.通过分离和表征木质素-碳水化合物复合物来理解漆酶-介体系统对纸浆脱木质素的作用。
Biomacromolecules. 2013 Sep 9;14(9):3073-80. doi: 10.1021/bm4006936. Epub 2013 Aug 14.
10
Integration of shot-gun proteomics and bioinformatics analysis to explore plant hormone responses.基于 shotgun 蛋白质组学和生物信息学分析的植物激素响应研究
BMC Bioinformatics. 2012;13 Suppl 15(Suppl 15):S8. doi: 10.1186/1471-2105-13-S15-S8. Epub 2012 Sep 11.