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绘制过去十年癫痫遗传学的知识结构与趋势:基于医学主题词的共词分析

Mapping the knowledge structure and trends of epilepsy genetics over the past decade: A co-word analysis based on medical subject headings terms.

作者信息

Gan Jing, Cai Qianyun, Galer Peter, Ma Dan, Chen Xiaolu, Huang Jichong, Bao Shan, Luo Rong

机构信息

Department of Pediatrics, West China Second University Hospital, Sichuan University, Chengdu.

Key Laboratory of Birth Defects and Related Diseases of Women and Children (Sichuan University) Ministry of Education, China.

出版信息

Medicine (Baltimore). 2019 Aug;98(32):e16782. doi: 10.1097/MD.0000000000016782.

Abstract

INTRODUCTION

Over the past 10 years, epilepsy genetics has made dramatic progress. This study aimed to analyze the knowledge structure and the advancement of epilepsy genetics over the past decade based on co-word analysis of medical subject headings (MeSH) terms.

METHODS

Scientific publications focusing on epilepsy genetics from the PubMed database (January 2009-December 2018) were retrieved. Bibliometric information was analyzed quantitatively using Bibliographic Item Co-Occurrence Matrix Builder (BICOMB) software. A knowledge social network analysis and publication trend based on the high-frequency MeSH terms was built using VOSviewer.

RESULTS

According to the search strategy, a total of 5185 papers were included. Among all the extracted MeSH terms, 86 high-frequency MeSH terms were identified. Hot spots were clustered into 5 categories including: "ion channel diseases," "beyond ion channel diseases," "experimental research & epigenetics," "single nucleotide polymorphism & pharmacogenetics," and "genetic techniques". "Epilepsy," "mutation," and "seizures," were located at the center of the knowledge network. "Ion channel diseases" are typically in the most prominent position of epilepsy genetics research. "Beyond ion channel diseases" and "genetic techniques," however, have gradually grown into research cores and trends, such as "intellectual disability," "infantile spasms," "phenotype," "exome," " deoxyribonucleic acid (DNA) copy number variations," and "application of next-generation sequencing." While ion channel genes such as "SCN1A," "KCNQ2," "SCN2A," "SCN8A" accounted for nearly half of epilepsy genes in MeSH terms, a number of additional beyond ion channel genes like "CDKL5," "STXBP1," "PCDH19," "PRRT2," "LGI1," "ALDH7A1," "MECP2," "EPM2A," "ARX," "SLC2A1," and more were becoming increasingly popular. In contrast, gene therapies, treatment outcome, and genotype-phenotype correlations were still in their early stages of research.

CONCLUSION

This co-word analysis provides an overview of epilepsy genetics research over the past decade. The 5 research categories display publication hot spots and trends in epilepsy genetics research which could consequently supply some direction for geneticists and epileptologists when launching new projects.

摘要

引言

在过去10年里,癫痫遗传学取得了显著进展。本研究旨在基于医学主题词(MeSH)术语的共词分析,分析过去十年癫痫遗传学的知识结构和进展。

方法

检索PubMed数据库(2009年1月至2018年12月)中聚焦癫痫遗传学的科学出版物。使用文献计量信息共现矩阵构建器(BICOMB)软件对文献计量信息进行定量分析。基于高频MeSH术语构建知识社交网络分析和发表趋势,使用VOSviewer软件完成。

结果

根据检索策略,共纳入5185篇论文。在所有提取的MeSH术语中,识别出86个高频MeSH术语。热点聚类为5类,包括:“离子通道疾病”、“离子通道疾病之外”、“实验研究与表观遗传学”、“单核苷酸多态性与药物遗传学”以及“遗传技术”。“癫痫”、“突变”和“发作”位于知识网络的中心。“离子通道疾病”通常处于癫痫遗传学研究最突出的位置。然而,“离子通道疾病之外”和“遗传技术”已逐渐发展成为研究核心和趋势,如“智力残疾”、“婴儿痉挛症”、“表型”、“外显子组”、“脱氧核糖核酸(DNA)拷贝数变异”以及“下一代测序的应用”。虽然诸如“SCN1A”、“KCNQ2”、“SCN2A”、“SCN8A”等离子通道基因在MeSH术语中占癫痫基因的近一半,但一些其他离子通道外基因如“CDKL5”、“STXBP1”、“PCDH19”、“PRRT2”、“LGI1”、“ALDH7A1”、“MECP2”、“EPM2A”、“ARX”、“SLC2A1”等越来越受欢迎。相比之下,基因治疗、治疗结果以及基因型 - 表型相关性仍处于研究的早期阶段。

结论

这种共词分析提供了过去十年癫痫遗传学研究的概述。这5个研究类别展示了癫痫遗传学研究的发表热点和趋势,从而可为遗传学家和癫痫学家开展新项目提供一些方向。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/709c/6709143/6f29cae4527e/medi-98-e16782-g001.jpg

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